Emiliania huxleyi: EMIHUDRAFT_463197
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Entry
EMIHUDRAFT_463197 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
ehx
Emiliania huxleyi
Pathway
ehx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EMIHUDRAFT_463197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehx03019
]
EMIHUDRAFT_463197
Messenger RNA biogenesis [BR:
ehx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
EMIHUDRAFT_463197
U7-dependent histone pre-mRNA processing factors
EMIHUDRAFT_463197
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
17273351
NCBI-ProteinID:
XP_005780234
JGI:
Emihu1_463197
UniProt:
A0A0D3JWC0
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MASASGSALAAPTTVRTSVHFTPLRGSSGGAAPSGLLEVDGLTLLLDCGWEPPFDVSVLE
PLRGVAARVDAVLLSHGDLAHAGGLAFAFARLGLSCPVYATLPVSRLSKLALYDAHEGVA
EQSAAGAPFTLDEIDAALSRVSELKYSQTVLLSGRAAGLSLTPLPAGGSLGGAMWRVSKA
LEEVDTCFRVLELCLVLEAMWAADRKMQRYGLVLLSHVASATVHLAASQLEWMGAQVVLA
SAADASHGFAARLLPAVCAAPNALLLFTAPPRPGTIGASLLASPMPPTVSLKTRASRRGR
RLVSQEVRVRCRVELLDFSGGADGRALRAVLPRLGASSAVLLGVERDAAEEMKAHLEASA
PVGRPLAATVATDGERIDASYRLKLDDKLLASLKLTRVAAYDLAHATGFLRKPRDLRRGV
AAVLEPPSSAPAAPAPPAIAHAGGGGGAAAPASFDAAAAALAPAAAPPRPTRRRTTLVSA
GPLRLPELRNSLAREGVATELETGALLLGGGIVALTRPEPSELVLAGDFGATFLRARKRT
FEHLARI
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgccagcggcagcgctctcgccgcacccaccaccgtccgcaccagcgtgcac
ttcaccccgctccgcggctcgtcgggcggcgcagcgccctccgggctcctcgaggtggac
ggcctcacactcctgctcgactgcggctgggagccgccgttcgacgtgtccgtgctggag
ccgctgcgcggggtggccgcgcgggtggacgcggtcctcctctcgcacggcgacctcgcg
cacgctggagggctcgcgttcgcctttgcgcggctcggcctctcctgccccgtgtatgcg
acgctgcccgtctcgcggctcagcaagctggcgctctacgacgcgcacgagggcgtcgcc
gagcagtcggcggcgggcgcgcccttcacgctcgacgagatcgacgccgcgctcagccgc
gtgtccgagctcaagtactcgcagaccgtcctcttgtcgggccgcgccgccgggctgagc
ctcactcccctcccggcgggcgggtcgctgggcggcgcgatgtggcgcgtgagcaaggcg
ctcgaggaggtcgacacctgcttccgcgtcctcgagctctgccttgtcctcgaggcaatg
tgggccgccgaccgaaagatgcagcggtacggcctcgtcctcctctcccacgtggcgagc
gcgacggtccacctcgccgcctcccagctcgagtggatgggcgcacaggttgtgcttgcc
tcggccgccgacgcgtctcacggcttcgcggcgcggctgctgcccgccgtctgcgccgcg
ccgaacgcgctgctgctcttcacggcgccgccgcggcccggcaccatcggcgcctcgctc
ctcgcctcgcccatgccgcccaccgtctcgctcaagacgcgggcgagccgccggggacgg
cgcctggtgtcgcaggaggtgcgcgtgcgctgccgcgtcgagctgctcgactttagcggc
ggcgccgacggccgcgccttgcgtgccgtgctgcctcggctcggagcctcgagcgcggtg
ctgctcggtgtggagcgcgacgcggccgaggagatgaaggcgcacctcgaggcgagcgcg
ccggtcggacggccgctggcggcgaccgtcgccacggacggcgagcggatcgacgcgtcg
taccggctcaagctcgacgacaagctcctcgctagcctcaagctcacgcgcgtcgccgca
tacgacctcgcgcacgccaccggcttcctgcgcaagccgcgagacttgcgccgcggcgtc
gccgctgtgctggagccgccgtcctctgcacccgccgcacccgccccccctgcaatcgcg
cacgccggtggtggtggcggggccgccgcccctgcgtctttcgacgccgctgccgccgcg
cttgcgccggcggctgccccgccgaggccgacgcgccggcgcaccacgctggtgtctgcg
ggcccgctgcggctgccggagctgcgcaacagcctcgcgcgcgagggcgtggcgacggag
ctcgagacaggggccttgctgctcggaggcgggattgtggcgctgacgcggccggagccg
agcgagctcgtcctcgcgggcgattttggcgccacctttctccgcgcgcgcaagcggacc
tttgagcacctcgcgaggatttga
DBGET
integrated database retrieval system