KEGG   Emiliania huxleyi: EMIHUDRAFT_463197
Entry
EMIHUDRAFT_463197 CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K14402  cleavage and polyadenylation specificity factor subunit 2
Organism
ehx  Emiliania huxleyi
Pathway
ehx03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    EMIHUDRAFT_463197
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ehx03019]
    EMIHUDRAFT_463197
Messenger RNA biogenesis [BR:ehx03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     EMIHUDRAFT_463197
    U7-dependent histone pre-mRNA processing factors
     EMIHUDRAFT_463197
SSDB
Motif
Pfam: Lactamase_B_6 CPSF100_C Beta-Casp Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-GeneID: 17273351
NCBI-ProteinID: XP_005780234
JGI: Emihu1_463197
UniProt: A0A0D3JWC0
LinkDB
Position
Unknown
AA seq 547 aa
MASASGSALAAPTTVRTSVHFTPLRGSSGGAAPSGLLEVDGLTLLLDCGWEPPFDVSVLE
PLRGVAARVDAVLLSHGDLAHAGGLAFAFARLGLSCPVYATLPVSRLSKLALYDAHEGVA
EQSAAGAPFTLDEIDAALSRVSELKYSQTVLLSGRAAGLSLTPLPAGGSLGGAMWRVSKA
LEEVDTCFRVLELCLVLEAMWAADRKMQRYGLVLLSHVASATVHLAASQLEWMGAQVVLA
SAADASHGFAARLLPAVCAAPNALLLFTAPPRPGTIGASLLASPMPPTVSLKTRASRRGR
RLVSQEVRVRCRVELLDFSGGADGRALRAVLPRLGASSAVLLGVERDAAEEMKAHLEASA
PVGRPLAATVATDGERIDASYRLKLDDKLLASLKLTRVAAYDLAHATGFLRKPRDLRRGV
AAVLEPPSSAPAAPAPPAIAHAGGGGGAAAPASFDAAAAALAPAAAPPRPTRRRTTLVSA
GPLRLPELRNSLAREGVATELETGALLLGGGIVALTRPEPSELVLAGDFGATFLRARKRT
FEHLARI
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggccagcgccagcggcagcgctctcgccgcacccaccaccgtccgcaccagcgtgcac
ttcaccccgctccgcggctcgtcgggcggcgcagcgccctccgggctcctcgaggtggac
ggcctcacactcctgctcgactgcggctgggagccgccgttcgacgtgtccgtgctggag
ccgctgcgcggggtggccgcgcgggtggacgcggtcctcctctcgcacggcgacctcgcg
cacgctggagggctcgcgttcgcctttgcgcggctcggcctctcctgccccgtgtatgcg
acgctgcccgtctcgcggctcagcaagctggcgctctacgacgcgcacgagggcgtcgcc
gagcagtcggcggcgggcgcgcccttcacgctcgacgagatcgacgccgcgctcagccgc
gtgtccgagctcaagtactcgcagaccgtcctcttgtcgggccgcgccgccgggctgagc
ctcactcccctcccggcgggcgggtcgctgggcggcgcgatgtggcgcgtgagcaaggcg
ctcgaggaggtcgacacctgcttccgcgtcctcgagctctgccttgtcctcgaggcaatg
tgggccgccgaccgaaagatgcagcggtacggcctcgtcctcctctcccacgtggcgagc
gcgacggtccacctcgccgcctcccagctcgagtggatgggcgcacaggttgtgcttgcc
tcggccgccgacgcgtctcacggcttcgcggcgcggctgctgcccgccgtctgcgccgcg
ccgaacgcgctgctgctcttcacggcgccgccgcggcccggcaccatcggcgcctcgctc
ctcgcctcgcccatgccgcccaccgtctcgctcaagacgcgggcgagccgccggggacgg
cgcctggtgtcgcaggaggtgcgcgtgcgctgccgcgtcgagctgctcgactttagcggc
ggcgccgacggccgcgccttgcgtgccgtgctgcctcggctcggagcctcgagcgcggtg
ctgctcggtgtggagcgcgacgcggccgaggagatgaaggcgcacctcgaggcgagcgcg
ccggtcggacggccgctggcggcgaccgtcgccacggacggcgagcggatcgacgcgtcg
taccggctcaagctcgacgacaagctcctcgctagcctcaagctcacgcgcgtcgccgca
tacgacctcgcgcacgccaccggcttcctgcgcaagccgcgagacttgcgccgcggcgtc
gccgctgtgctggagccgccgtcctctgcacccgccgcacccgccccccctgcaatcgcg
cacgccggtggtggtggcggggccgccgcccctgcgtctttcgacgccgctgccgccgcg
cttgcgccggcggctgccccgccgaggccgacgcgccggcgcaccacgctggtgtctgcg
ggcccgctgcggctgccggagctgcgcaacagcctcgcgcgcgagggcgtggcgacggag
ctcgagacaggggccttgctgctcggaggcgggattgtggcgctgacgcggccggagccg
agcgagctcgtcctcgcgggcgattttggcgccacctttctccgcgcgcgcaagcggacc
tttgagcacctcgcgaggatttga

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