Emiliania huxleyi: EMIHUDRAFT_463218
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Entry
EMIHUDRAFT_463218 CDS
T02915
Name
(RefSeq) putative DEAD/DEAH box helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EMIHUDRAFT_463218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehx03041
]
EMIHUDRAFT_463218
03009 Ribosome biogenesis [BR:
ehx03009
]
EMIHUDRAFT_463218
Enzymes [BR:
ehx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EMIHUDRAFT_463218
Spliceosome [BR:
ehx03041
]
Complex A
U1 snRNP components
U1 related factors
EMIHUDRAFT_463218
Complex B
EMIHUDRAFT_463218
Ribosome biogenesis [BR:
ehx03009
]
Eukaryotic type
Pre-60S particles
Helicases
EMIHUDRAFT_463218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
Fer4_ETF_QO
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
17273424
NCBI-ProteinID:
XP_005780307
JGI:
Emihu1_463218
UniProt:
A0A0D3JWJ3
R1CXS7
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MRRLLAAPRWQRLAALPALPVAHRPCAPLRRAASSLADRPEDAAAAAAAASAGSFAEQHG
ITLTGDLGEVDATPATSFAALRRTVGGVDQPLPTAVAHFLHKRGFDAPSPIQAQSLPLTL
AGRDVAQQIHEEARPLAAAFGCRTTCVFGGMRKYLQEREADRMLDMGFEPQLREIVDHLP
ADGGRQTFMFSATWPSEARKLKEEKTPVRKLAMDFLDDPVRINVGGEDELVAAKSIVQQV
RLCDARGAKLIDSSDLIEKMEAAMKEEGHGNARSSRACHTIVFVNRKRDAEMVAEYIERN
VEGVRAESLHGDLLQGRRDRVRDNVKSGRAQVLVATDVAARGLDVRTIRQVINYDMPNNM
EDYIHRIGRTGRAGASGDAISFFHPDEDAAVAGKLAKVLRDHGQEVSEELHDLVKANSSR
RFSTRSFRGNGGQRNRRGGGYRRDGGGNGGAAYATRGRNGGGGYGGGYGGGGGSYGGGGG
GRQGSRRRDFDRFDDDDGYGDFDRRQDSGYGSGGGGGSRRGGGYGRRGGSGPRGSGGSGG
IHCKTCDIKCPSQNIDWVVPEGGGGPAYAGM
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgcctgctcgctgcgcctcgctggcagcgattagcggcgctgcctgcgctgccg
gtcgcgcatcggccgtgcgcgcctctccgccgcgccgcctccagtctcgccgaccgcccc
gaggacgccgccgccgccgccgccgccgcgagcgccggcagctttgcggagcagcacggc
atcacgctgaccggcgatctgggcgaggtggacgcgacgccggccacgtcgttcgcggcg
ctgcgacgcaccgtcggcggcgtcgaccagccgctccccaccgccgtcgcccacttcttg
cacaagcgcgggtttgacgcgccgagcccgatccaggcgcagtcgctgccgctgacgctg
gcggggcgcgacgtggcgcagcagatccacgaggaggcgaggcccctcgccgccgccttt
ggctgccgcaccacttgcgtcttcgggggcatgcgaaagtacctgcaggagcgggaggcg
gatcgcatgctcgatatggggttcgagccgcagctgcgggagatcgtcgaccatttgccc
gcagacggcggccggcagaccttcatgttttcggcgacgtggccttcggaggcgcgcaag
ctgaaggaggagaagactccagtgcgcaagctcgcgatggactttctggacgacccggtc
cggatcaacgttggcggggaggacgagcttgtcgccgctaagtcgattgtgcagcaggtg
cggctctgcgacgcgcgcggcgccaagctgatcgactcttccgacctgatcgagaagatg
gaggcggcgatgaaggaggagggccacggcaacgcgcgctcctcgcgcgcctgccacacc
atcgtctttgtcaaccggaagcgagacgcggagatggtggccgagtatatcgagcgcaac
gtcgagggcgtgcgcgccgagtcgctgcacggcgatttgctgcagggccggcgggaccgg
gtacgcgacaacgtcaagagcggtcgcgcgcaggtgctcgtcgccacggacgtcgcggcg
cgcggcctcgacgtgcgcaccatccgacaggtcatcaactacgacatgccaaacaatatg
gaggactacatccaccgcatcggccgcaccggccgcgcgggcgcgagcggcgacgccatc
tccttcttccacccggatgaggacgcggccgtcgccggcaagctggcgaaggtgctgcgg
gaccatgggcaagaggtgtccgaggagctgcacgacctcgtcaaggccaactcgagccgc
cgcttcagcacccgctcgttccgcggcaacggcgggcagcgcaaccgccgcggcggaggc
taccgccgcgacggcggaggcaacggcggcgcagcctacgccacgcggggccgcaacggc
ggaggaggctacggcggcggctacggcggcggcggtggcagctacggcggcggcggcgga
gggcgccaaggttcccgccggcgcgactttgaccgcttcgacgacgacgatggctacggc
gacttcgaccggcgacaggacagcgggtacggcagtggcggcggcggcggcagccggcgc
ggcggcgggtacgggcggcggggcgggtcggggccccgcggctcgggcgggtcgggcggc
atccactgcaagacgtgcgacatcaagtgcccctcgcagaacatcgactgggtcgtgccc
gaggggggcggcgggccggcgtacgccggcatgtga
DBGET
integrated database retrieval system
