Emiliania huxleyi: EMIHUDRAFT_464061
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Entry
EMIHUDRAFT_464061 CDS
T02915
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03082
ATP-dependent chromatin remodeling
ehx03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
EMIHUDRAFT_464061
03083 Polycomb repressive complex
EMIHUDRAFT_464061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ehx03036
]
EMIHUDRAFT_464061
Enzymes [BR:
ehx01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
EMIHUDRAFT_464061
Chromosome and associated proteins [BR:
ehx03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
EMIHUDRAFT_464061
HDAC complexes
Sin3A-HDAC complex
EMIHUDRAFT_464061
BRAF-HDAC complex
EMIHUDRAFT_464061
REST complex
EMIHUDRAFT_464061
SHIP complex
EMIHUDRAFT_464061
MiDAC complex
EMIHUDRAFT_464061
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
EMIHUDRAFT_464061
Heterochromatin formation proteins
Other heterochromatin formation proteins
EMIHUDRAFT_464061
Chromatin remodeling factors
NuRD complex
EMIHUDRAFT_464061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
RP-C_C
Motif
Other DBs
NCBI-GeneID:
17264315
NCBI-ProteinID:
XP_005771173
JGI:
Emihu1_464061
UniProt:
R1ECW4
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MGSRAQTGLLLVPSDALGLGLTWGSRGRPGFASLKAPGEPSFRPHVAQPHHRKRNKPRRT
PPLQQNEGLTDNLVVDCGLDKHMTMVRSGGDGWSPAPAATVRRYHTDAYVAFLEKIELHG
KEVANEAANYVLNNSVCFSETAWPYAQIYAGASMHAAELLATGKADIAINWSGGQAHARR
DCASGFSYVNDVVLAVLTLLQSVERVLFINVDSVHASGVEEAFYTTDRVMCVSLHRHGDG
YFPGSGGAKDAGERAGKGHNINLPVERGFSDADLEALLPPVVEAAAARYQPAAVVLLAGT
GLLSGDRLGCMNVTLGGYSKAVECVLALRRPTLLLGGGGYTTSIATRAWQLSETVMGNEN
GAAALAATREAALERIASTPARDPPVVPSPPAAAEASLPADGAAPAGAADKTAAAGGSDP
AAAEASNGTPSAAEPQPAAAAQAPAAAGGDAPPPAAAGLAASAPPAAAPAPPPSEPASAA
GVPPAAPAGATAAEPMDVDSPEPPPQHLPPQQSGGEAAAAGIV
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgggctctagggctcagactggactcctcttggtcccttctgatgccctaggcctgggc
cttacctggggctctaggggccggccagggtttgcctccctaaaggcgcccggagaacca
agcttccgcccgcatgtcgcgcagccacaccaccgcaagcgcaacaagccgcgccggacg
ccacccttgcagcagaacgaagggctgaccgacaacctggtcgtcgactgcgggctggac
aagcacatgaccatggtgcggagcggcggcgacggctggtcgccagcgcctgccgcgacg
gtccgccgctaccacacggacgcgtacgtcgcctttctcgagaagattgagctgcacggc
aaggaggtggccaatgaggctgcaaactacgtgctcaacaactcggtctgcttcagcgag
acggcctggccgtacgcgcagatctacgcgggcgcatccatgcacgccgccgagctcctc
gccaccggcaaggcggacatcgccatcaactggagcggggggcaggcgcacgcgcggcgt
gactgcgcgtcgggcttctcgtacgtcaatgacgtggtgctggccgtgctgacgctgctg
cagagcgtcgagcgtgtgctcttcatcaacgtggactcggtgcacgcgtcgggcgtcgag
gaggccttctacaccaccgaccgcgtcatgtgcgtctcgctgcatcgccacggcgacggc
tacttccccggctcgggcggcgcaaaggacgcgggcgagcgggcgggcaaggggcacaac
atcaaccttcccgtcgagcgcggcttcagcgacgccgacctcgaggccctgctcccgccc
gtcgtcgaggcggcggccgcccgctaccagcctgctgcagtggtgctgcttgccggcacg
ggcttgctctctggcgaccggctcggctgcatgaacgtcacgctgggcgggtacagcaag
gcggtggaatgcgtgctcgcgctgcgcaggcctacgctgcttctcggcggaggggggtac
acgacttcgatcgcgacgcgagcttggcagctgtccgagaccgtcatggggaacgagaac
ggtgcggccgcgcttgccgcgacgcgagaggcggcgctggagcggatcgcgtcgacgccc
gcacgagaccctcctgttgtgccgtcgccgcccgccgccgccgaggcgtccctgcccgcc
gacggtgcggcgccggccggagcggcagacaagacggcggcggcgggtgggagcgaccca
gcggctgccgaggcgtccaacggcacgccgtccgccgccgagccgcagcctgccgccgca
gcgcaggcgcccgccgcagcgggcggagacgcgccaccgcccgccgccgccggtcttgcc
gcctccgcgccgcccgccgcagcgcccgcgccgccgccgtccgagccggccagcgcggcc
ggtgtgccgcccgccgcgcccgcgggggcgacggcggcggagccgatggacgtcgactca
ccggagccgccgccgcagcacctgcctccgcaacagagcggcggcgaggcggccgccgct
ggcatcgtttga
DBGET
integrated database retrieval system