Emiliania huxleyi: EMIHUDRAFT_465027
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Entry
EMIHUDRAFT_465027 CDS
T02915
Name
(RefSeq) Apurinic/apyrimidinic endonuclease
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
ehx
Emiliania huxleyi
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ehx03400
]
EMIHUDRAFT_465027
Enzymes [BR:
ehx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
EMIHUDRAFT_465027
DNA repair and recombination proteins [BR:
ehx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EMIHUDRAFT_465027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Mpv17_PMP22
Motif
Other DBs
NCBI-GeneID:
17257712
NCBI-ProteinID:
XP_005764032
JGI:
Emihu1_465027
UniProt:
A0A0D3IK18
R1BNL6
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MQWPAARAALPRGGRLAEALQRAMRGPRSLGSTYARLSDAHPHKVASATACSVLGASDAT
AQLISHHSSPPDGRPFSFDWQRWRALVIWGTAFYGGPCRHFYMLYDRWFGNAPLIKAAVD
VFGNGAFIVVPSFYLTTGLLKGQTLAEAGRQLSEEWVTAASGTVAFWLPACSLNFAFVPP
HSRILVITAMSLLHKTWLSLLSNEGRASQPCCHRGSEPSHPLRVVSWNIGLRGLATLASS
TAASFDAPDVHGISRRQSFGSLAALLAALDADIVCFQEVKLREMERHLALVDGWDSYFSL
CRAREPRTSGGRYAGVATFCRTGCRPRLAAEGVTGVLDSSIGHRASLVAESSEEELRQID
SEGRCVITVHADLALLNVYAPANTASDPEESERRRAFKASFLRALELRCRDLAAAGLRVL
LIGDMNISPSRLDSAREAELLQAPPPPSASRLWLQALLGPPRPFFADAFRALHPARGGAY
SCFHVASGADRHNYGSRIDLALLAPPPLLPSSGQAGSGQAGSGQAGSGLADGSSAHASVG
ATAPPSRRGGPSFDLSLFSDCSAAAPPLSLHACEIVELEGSDHLPLRLLLSGLEQRSPPP
QLPLSSRSRLGGQSVLSGFLVSQPPPPATAPAQPAAPPAQPAAAPSPAAPPRQDLRRFFG
GSERGGDERGRQRASGRAAEARAGAAETALSARAVAEDSRAWEQLREVAPPRGGAGGGGA
GGGGAGGGGAAQREAWQQVMQRMSDKVPRCHHGEKCRVQVVKKAGPTQGKTFYSCARAEG
HRGDKESNCRFFQWAAAAERKRKGPPAA
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgcagtggcccgcggcccgcgccgccctgcctcgcggcggccgcctcgctgaagcgctg
cagcgggcgatgcgcggaccgcgctcgcttggatccacctatgcccgcctgtccgacgcg
cacccgcacaaggtggcgtcggcgacagcgtgctccgtgctcggcgcctcggacgcgacg
gcgcagctcatctcccatcactccagcccgccggacgggcggcccttttcctttgactgg
cagcgctggcgcgcgctcgtgatatggggcacggccttctacggcgggccgtgccggcac
ttttacatgctctacgatcgctggtttgggaacgcgccgctgatcaaggcggccgtcgac
gtgtttgggaatggcgccttcatcgtggtgccgagcttctacctgacgaccgggctgctc
aaggggcagacgctggcagaggcaggacgtcagctctcagaggagtgggtcacggccgca
tcgggcacggtcgccttttggctgccggcctgcagcctcaactttgcctttgtccctccc
cacagccgcatcctcgtcatcaccgccatgtcgctgctgcacaagacgtggctctcgctg
ttgtccaacgaggggcgagcgtctcagccctgctgccatcggggctcggaacccagccat
ccgctgcgagtcgtctcctggaacattgggctgcgcggcctcgcgacgctcgcgtcgagc
accgcggcctcgttcgatgcgccggacgtgcacggcatctcgcggcgtcagagctttggc
tcgctcgccgcgctgctcgcggctctcgacgccgacattgtctgctttcaggaggtgaag
ctgcgcgagatggagcggcatctggcgctcgtggacgggtgggactcctacttttctctc
tgccgcgcacgcgagccgcgcacgtcgggcggtcgctacgccggcgttgccacgttttgc
cgcactggctgtcggccgcggctcgccgcggagggcgtgacgggcgtgctcgactcgtcc
atcgggcaccgcgcgagcctcgtcgccgagtcgagcgaggaggagctgcggcagatcgac
tcggagggccggtgcgtcatcaccgtccatgccgacctcgccctgctcaacgtgtacgcg
cctgccaacacggcgtccgacccggaagagtcggagcggaggcgcgccttcaaggcgagc
ttcctgcgcgcactcgagctgcgctgccgcgacctcgcggcggcggggctgcgcgtcctc
ctcatcggcgacatgaacatctcgccctcgcgcctcgactctgctcgcgaggcggagctg
ctgcaagcgcctccgccgccgtccgcctcgcggctgtggctgcaggcgctgctggggccg
ccgcggcccttcttcgcagacgcgttccgagccctccacccggcccgcggcggggcgtac
agctgcttccacgtcgcttccggcgccgaccggcacaactacggctcgcgcatcgacctc
gccctcctcgcgccgcctccgctcctcccctcctcgggacaggctggctcggggcaggct
ggctcggggcaggctggctcggggctggctgacggcagctctgcacacgcgtcggtcggc
gccaccgcccctccttcgcggcggggcggcccctccttcgacctctctctcttctcggac
tgctcggccgccgcgccgcccctgtccctgcacgcgtgcgagatcgtcgagctcgaggga
tccgaccacctccccctccgcctcctcctctccggactcgagcagcgctcgccgccgccg
cagctgccgctgagcagccggtctcggctcggagggcagagtgtgctcagcggcttcctc
gtctcgcagccgccgccgcccgccaccgcgccggcgcagcccgccgcgccgccggcgcag
cccgccgccgcaccgtcgcccgcggccccgccgcgtcaagatttgcgccgcttcttcggc
ggcagcgagcgtggcggcgatgagcgcgggcgtcagagggcgagcgggcgggcggcggag
gcgcgcgctggcgcggcggagacggcgctgagcgctcgagccgtggcggaggactcgcgc
gcctgggagcagctgcgggaggtggcacctcctcgcggcggcgcgggcggaggcggcgcg
ggcggaggcggcgcgggcggaggcggcgcggcgcagcgggaggcgtggcagcaggtgatg
cagcggatgtccgacaaggtgccgcgctgccaccacggcgagaagtgccgcgtgcaggtc
gtcaagaaggcggggccgacgcagggaaagacgttctacagctgcgcgcgcgccgagggg
caccgcggcgacaaggagagcaactgccgcttcttccagtgggccgccgctgccgagcgc
aagcgcaaggggccgccggcggcatga
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