Emiliania huxleyi: EMIHUDRAFT_465037
Help
Entry
EMIHUDRAFT_465037 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03020
RNA polymerase
ehx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EMIHUDRAFT_465037
09124 Replication and repair
03420 Nucleotide excision repair
EMIHUDRAFT_465037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehx03021
]
EMIHUDRAFT_465037
03400 DNA repair and recombination proteins [BR:
ehx03400
]
EMIHUDRAFT_465037
Enzymes [BR:
ehx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EMIHUDRAFT_465037
Transcription machinery [BR:
ehx03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
EMIHUDRAFT_465037
DNA repair and recombination proteins [BR:
ehx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
EMIHUDRAFT_465037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_5
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
17257756
NCBI-ProteinID:
XP_005764063
JGI:
Emihu1_465037
UniProt:
A0A0D3IK49
R1DSC8
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MGADDEAGEEINQEDVWEVISAYFDEKGLVRQQLDSFDEFIMNTMQEIVDESPKLELVPN
QQHNPTMQTAGAVSYGIQFGQIYLSKPTWVEADQTTSAMFPNEARLRNLTYAAPLYMDLT
QTTRTEDPDDPDGAADEEKQQLDKVFLGQVPIMLRSTYCILKDSNDRELTDLGARRKHAG
CCAGERRGSGARTEIVDGRGSAAVGECPYDQGGYFVINGSEKELVLIAQEKMTNNAVKNL
SLMAYISVGSAPEPILEFLEEWATENLEEIQPSAIPAATKVFVNGAWSLLVIGQSQPPIG
IHHQPDQLVKTLRAMRRGVDISAEVSIARELRLFSDAGRCCRPILIVEDQSLLLKKEHID
KLRDKEVSRFNWSDCIANGLIEYIDTEEEETVMIAMNLSDLRADNRMYRYTHCEIHPSMI
LGICASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNYQLRMDTMANVLYYPQKPLGITRS
MSYLHFRELPAGINATVAIMCYSGYNQEDSVIFSQSSIDRGFFRSVFYRCYRDEERKVYF
SGDRGGPESGRSEKFERPSRETVEGLRRCDYSKLDEDGLVPPGVRVSGDDIIIGKTAPVE
PRAEELQDAGAARYEKRDASTPLRSSEAGYVDQVLLTTNQEGRKFVKVRIRSVRVPQIGD
KFASRHGQKGTIGITYRQEDMPFNCEGITPDIIVNPHAIPSRMTIGAPPFPPPPSGPEAS
LPPPPPSPR
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccgacgacgaggccggcgaggagatcaatcaggaggatgtgtgggaggttatc
tccgcctactttgacgagaaggggctggtgcggcagcaactcgactcgttcgatgagttc
atcatgaacacgatgcaggagatcgtcgacgagtcgccgaaactcgagctcgtcccgaac
cagcagcacaacccgacgatgcagacggccggcgccgtctcgtacgggattcagtttggc
cagatctacctgtccaagccgacgtgggtggaggcggaccagacgacgtcggcgatgttc
cccaacgaggcgcggctgcgcaacctcacctacgccgccccgctctacatggacctcacg
cagaccacgcgcaccgaggacccggacgacccggacggcgcggcggacgaggagaagcag
cagctggacaaggtcttcctggggcaggtgccgatcatgctccgctccacctactgcatc
ctcaaggactccaacgaccgcgagctcaccgacctcggtgcgcgccggaagcacgccggg
tgttgcgcgggggagcggcggggcagcggggcgcggacagagattgtcgacggccgcggc
tccgcggcagtcggcgagtgcccgtacgaccagggcgggtacttcgtcatcaacggctcc
gagaaggagctcgtcctcatcgcccaggagaagatgacaaacaacgccgtcaagaacctc
tctctgatggcctacatctcggtcggctccgcgcccgagcccatcctcgagttcctcgag
gagtgggcgaccgagaacctcgaggagatccaaccctccgccatccccgccgccacaaag
gtcttcgtcaacggcgcctggtcactcctcgtcatcgggcagtctcaaccaccaataggc
atccaccaccagcccgaccagctcgtcaagacgctgcgcgcgatgcggcgcggcgtcgac
atctcggccgaggtgtccatcgcgcgcgagctgcgcctcttctcggacgcgggccggtgc
tgccgcccgatcctgatcgtcgaggaccagtcgctgctgctcaagaaggagcacatcgac
aagctgcgcgacaaggaggtgtcgcgcttcaactggtccgactgcatcgccaacgggctc
atcgagtacatcgacaccgaggaggaggagacggtgatgatcgcgatgaacctctccgac
ctgcgcgccgacaaccggatgtaccgctacacgcactgcgagatccacccctcgatgatc
ctcggcatctgcgcgtcgatcatccccttcccggaccacaaccagtcgccgcgcaacacg
taccagtccgccatgggcaagcaggccatgggcgtgtacatcaccaactaccagctgcgg
atggacacgatggccaacgtgctctactacccgcaaaagccgctcggcatcactcgctcg
atgtcgtacctccacttccgcgagctgcccgccggcatcaacgcgacggtggcgatcatg
tgctactcgggctacaaccaggaggactcggtcatcttctcgcagtcctcgatcgaccgc
ggcttcttccgctccgtcttttaccgctgctaccgcgacgaggagcgcaaggtctacttc
tcgggcgaccgcggcgggccagagagcggccgctccgaaaagttcgagcggccgtcgcgc
gagacggtcgaggggctgcgccggtgcgactactcgaagctggacgaggacgggctcgtg
ccgcccggcgtgcgcgtgtcgggagacgacatcatcatcggcaagacggcgcccgtcgag
ccgcgcgccgaggagctgcaggacgccggcgcggcgcgctacgagaagcgagacgcctcg
acgccgctccggtcgtcggaggctggctacgtcgaccaggtgctgctcacgaccaaccag
gaggggcgaaagttcgtcaaggtgcggatccgctcggtgcgggtgccgcagatcggcgac
aagttcgcgtcgcgccacggccaaaaggggacgatcggcatcacctaccggcaggaggac
atgcccttcaactgcgagggcatcacgcccgacatcatcgtcaacccgcacgcgatcccc
tcccgcatgaccatcggcgcgccccccttcccccctcccccctccggcccggaggcctct
ctgccccccccccccccctccccccgctaa
DBGET
integrated database retrieval system