KEGG   Emiliania huxleyi: EMIHUDRAFT_465037
Entry
EMIHUDRAFT_465037 CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K03010  DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Organism
ehx  Emiliania huxleyi
Pathway
ehx03020  RNA polymerase
ehx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EMIHUDRAFT_465037
  09124 Replication and repair
   03420 Nucleotide excision repair
    EMIHUDRAFT_465037
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ehx03021]
    EMIHUDRAFT_465037
   03400 DNA repair and recombination proteins [BR:ehx03400]
    EMIHUDRAFT_465037
Enzymes [BR:ehx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     EMIHUDRAFT_465037
Transcription machinery [BR:ehx03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     EMIHUDRAFT_465037
DNA repair and recombination proteins [BR:ehx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      EMIHUDRAFT_465037
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_5 RNA_pol_Rpb2_4
Other DBs
NCBI-GeneID: 17257756
NCBI-ProteinID: XP_005764063
JGI: Emihu1_465037
UniProt: A0A0D3IK49 R1DSC8
LinkDB
Position
Unknown
AA seq 729 aa
MGADDEAGEEINQEDVWEVISAYFDEKGLVRQQLDSFDEFIMNTMQEIVDESPKLELVPN
QQHNPTMQTAGAVSYGIQFGQIYLSKPTWVEADQTTSAMFPNEARLRNLTYAAPLYMDLT
QTTRTEDPDDPDGAADEEKQQLDKVFLGQVPIMLRSTYCILKDSNDRELTDLGARRKHAG
CCAGERRGSGARTEIVDGRGSAAVGECPYDQGGYFVINGSEKELVLIAQEKMTNNAVKNL
SLMAYISVGSAPEPILEFLEEWATENLEEIQPSAIPAATKVFVNGAWSLLVIGQSQPPIG
IHHQPDQLVKTLRAMRRGVDISAEVSIARELRLFSDAGRCCRPILIVEDQSLLLKKEHID
KLRDKEVSRFNWSDCIANGLIEYIDTEEEETVMIAMNLSDLRADNRMYRYTHCEIHPSMI
LGICASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNYQLRMDTMANVLYYPQKPLGITRS
MSYLHFRELPAGINATVAIMCYSGYNQEDSVIFSQSSIDRGFFRSVFYRCYRDEERKVYF
SGDRGGPESGRSEKFERPSRETVEGLRRCDYSKLDEDGLVPPGVRVSGDDIIIGKTAPVE
PRAEELQDAGAARYEKRDASTPLRSSEAGYVDQVLLTTNQEGRKFVKVRIRSVRVPQIGD
KFASRHGQKGTIGITYRQEDMPFNCEGITPDIIVNPHAIPSRMTIGAPPFPPPPSGPEAS
LPPPPPSPR
NT seq 2190 nt   +upstreamnt  +downstreamnt
atgggcgccgacgacgaggccggcgaggagatcaatcaggaggatgtgtgggaggttatc
tccgcctactttgacgagaaggggctggtgcggcagcaactcgactcgttcgatgagttc
atcatgaacacgatgcaggagatcgtcgacgagtcgccgaaactcgagctcgtcccgaac
cagcagcacaacccgacgatgcagacggccggcgccgtctcgtacgggattcagtttggc
cagatctacctgtccaagccgacgtgggtggaggcggaccagacgacgtcggcgatgttc
cccaacgaggcgcggctgcgcaacctcacctacgccgccccgctctacatggacctcacg
cagaccacgcgcaccgaggacccggacgacccggacggcgcggcggacgaggagaagcag
cagctggacaaggtcttcctggggcaggtgccgatcatgctccgctccacctactgcatc
ctcaaggactccaacgaccgcgagctcaccgacctcggtgcgcgccggaagcacgccggg
tgttgcgcgggggagcggcggggcagcggggcgcggacagagattgtcgacggccgcggc
tccgcggcagtcggcgagtgcccgtacgaccagggcgggtacttcgtcatcaacggctcc
gagaaggagctcgtcctcatcgcccaggagaagatgacaaacaacgccgtcaagaacctc
tctctgatggcctacatctcggtcggctccgcgcccgagcccatcctcgagttcctcgag
gagtgggcgaccgagaacctcgaggagatccaaccctccgccatccccgccgccacaaag
gtcttcgtcaacggcgcctggtcactcctcgtcatcgggcagtctcaaccaccaataggc
atccaccaccagcccgaccagctcgtcaagacgctgcgcgcgatgcggcgcggcgtcgac
atctcggccgaggtgtccatcgcgcgcgagctgcgcctcttctcggacgcgggccggtgc
tgccgcccgatcctgatcgtcgaggaccagtcgctgctgctcaagaaggagcacatcgac
aagctgcgcgacaaggaggtgtcgcgcttcaactggtccgactgcatcgccaacgggctc
atcgagtacatcgacaccgaggaggaggagacggtgatgatcgcgatgaacctctccgac
ctgcgcgccgacaaccggatgtaccgctacacgcactgcgagatccacccctcgatgatc
ctcggcatctgcgcgtcgatcatccccttcccggaccacaaccagtcgccgcgcaacacg
taccagtccgccatgggcaagcaggccatgggcgtgtacatcaccaactaccagctgcgg
atggacacgatggccaacgtgctctactacccgcaaaagccgctcggcatcactcgctcg
atgtcgtacctccacttccgcgagctgcccgccggcatcaacgcgacggtggcgatcatg
tgctactcgggctacaaccaggaggactcggtcatcttctcgcagtcctcgatcgaccgc
ggcttcttccgctccgtcttttaccgctgctaccgcgacgaggagcgcaaggtctacttc
tcgggcgaccgcggcgggccagagagcggccgctccgaaaagttcgagcggccgtcgcgc
gagacggtcgaggggctgcgccggtgcgactactcgaagctggacgaggacgggctcgtg
ccgcccggcgtgcgcgtgtcgggagacgacatcatcatcggcaagacggcgcccgtcgag
ccgcgcgccgaggagctgcaggacgccggcgcggcgcgctacgagaagcgagacgcctcg
acgccgctccggtcgtcggaggctggctacgtcgaccaggtgctgctcacgaccaaccag
gaggggcgaaagttcgtcaaggtgcggatccgctcggtgcgggtgccgcagatcggcgac
aagttcgcgtcgcgccacggccaaaaggggacgatcggcatcacctaccggcaggaggac
atgcccttcaactgcgagggcatcacgcccgacatcatcgtcaacccgcacgcgatcccc
tcccgcatgaccatcggcgcgccccccttcccccctcccccctccggcccggaggcctct
ctgccccccccccccccctccccccgctaa

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