Emiliania huxleyi: EMIHUDRAFT_465142
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Entry
EMIHUDRAFT_465142 CDS
T02915
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting 16
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
ehx
Emiliania huxleyi
Pathway
ehx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
EMIHUDRAFT_465142 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ehx04131
]
EMIHUDRAFT_465142 (VPS16)
Membrane trafficking [BR:
ehx04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
EMIHUDRAFT_465142 (VPS16)
Hops complex
EMIHUDRAFT_465142 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_C
Vps16_N
Motif
Other DBs
NCBI-GeneID:
17257048
NCBI-ProteinID:
XP_005763284
JGI:
Emihu1_465142
UniProt:
A0A0D3IHX0
R1D8S0
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MFADRLKHSDGERCYERHAAYQMRWDLDALGIPDGGLSSLLSAAAPNGGPLALLGAGAGD
PDSGVAAPQLRVYSASGEMIRGWPWLHGRCVGLGWSGRHELVAVLESGHALVWSMHGARL
AEFGLGAACEAHGLLSAEVLPDALLLLGKDCRCYALHALGSEAERRLVPLADPRLAAPGG
VPRALVATSTRTILLLDEREVQEDRLLSATEQLVAAYSSSTNALHVFSSDLEALHVFSSD
LEALHVFSSDLARNLSEFQTHAPRPPTAGRLGVVWCGSDALLLRSGGRWGGRVVMVGPYG
DCIQYEYAEPPLLFPEQAQSPRARLLAASAAFEARSAVAAELLRGLSQTELREGAAEHEM
SAGRQLSLLRAAAYGKPYIRHAGAAPSGGGGEGGEGGEGGEGEGGGGGAAASLSDEALLA
ALAPKLDATAGASHARLAAEALAVGRRGLAARLLEKEEDATRRVPLLLQMGEERLALTSA
VAHGDAELIYLLLLHLKARLPSALFFELLQPHPAAQRLLIHFCRQQDTKTLREFLYHADQ
PLEAPYAERLRLELRVPERRWWRIKVRGLAQLRDWPALWLFYNSARRPPLSAAAFAEAAI
ANGAPAEAARYAPRMPPAEAVPLLLQCGEASAARAIALANKDKNPELLRRVSAHLGAAP
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgacaggctcaagcacagcgacggcgagcgctgctacgagcgccatgccgcc
taccagatgcgttgggatctcgacgccctcggcatccccgacggaggcctcagcagcctc
ctctccgcagcggcgccgaacggtggtccactcgcactgctcggcgccggcgctggcgat
cccgacagcggcgtcgccgcgccgcagctccgcgtctacagtgcctcgggcgagatgatc
cgcggctggccgtggctgcatggccggtgcgtcgggctcggctggagcgggaggcatgag
ctcgttgccgtcctcgagtctgggcacgcgctcgtctggtcgatgcacggcgcgcggctg
gccgagtttgggctgggcgcggcgtgcgaggcgcacggcctgctcagcgccgaggtcctc
cccgacgccctcttgctcctcggcaaggactgccgctgctacgcgctgcacgcgttgggc
agcgaggccgagcggaggctcgtgccgctcgccgacccgcggcttgcggcgccgggcggc
gtcccgcgggccctcgtcgcaacgagtactcgcaccatcctcctgctggacgagcgggag
gtgcaggaggaccggctcctctcggccacagagcagctcgtcgccgcctacagctcttcc
accaacgccctccacgtcttctcctccgacctcgaggccctccacgtcttctcctccgac
ctcgaggccctccacgtcttctcctccgacctcgcccgaaacttgtccgagttccagacg
cacgcgccgcgccccccgacggcggggcgcctgggtgtcgtctggtgcggcagcgacgcg
ctgctgctgcggtcgggcggccggtggggcggccgggtggtgatggttgggccgtatgga
gactgcatccagtacgagtacgccgagccgccgctcctcttcccggagcaggcacaatct
ccccgagcgcgcctcctcgccgcgtcggcggcgttcgaggctcggtccgccgtcgccgca
gagctgctgcgcggcctgtcgcagaccgagctgcgcgagggcgcggcggagcacgagatg
agcgcagggcggcagctctctctcctccgcgccgccgcctacggcaagccatacatccgc
cacgccggagccgcgcccagcggcggcggcggcgagggcggcgagggtggcgagggcgga
gagggagagggcggcggcggcggcgcggccgcgtccctctcggacgaggcgctgctcgct
gcgctggcgccaaagctggacgcgacggcgggggcgtcgcacgcgagactggcggccgag
gcgctcgcggtcggtcggcgggggctggcggcgaggctgctcgagaaggaggaggacgcg
acgcgacgcgtgccgctgctgctgcagatgggggaggagcggcttgcgctgacaagtgcg
gtggcgcacggcgatgcggagctcatctacctgctgctgctgcacctcaaggcgaggctg
ccgtccgcgctcttcttcgagctgttgcagccccacccggcggcgcagcggctgctcatc
cacttttgccggcagcaagacacaaagacgcttcgcgagtttctgtaccacgccgaccag
cccctcgaggcgccgtacgcagagaggctacgcttggagctgcgcgtgccggagcggcgc
tggtggcggatcaaggtgcgcgggctcgcccagctgcgcgattggcccgccctctggctc
ttctacaactcggcgcgccggccgccgctcagcgccgccgcctttgccgaagcggccatc
gcaaacggcgcgccggcggaggccgcgcgctacgcgcctcggatgccgcccgccgaggcg
gtgccgctcctcctgcagtgcggcgaggcgagcgccgcgcgcgcgatcgcgctggcaaac
aaggacaagaaccccgagctgctgaggcgggtctccgcacacctcggggcggcgccttga
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