Emiliania huxleyi: EMIHUDRAFT_467751
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Entry
EMIHUDRAFT_467751 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
ehx
Emiliania huxleyi
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ehx03009
]
EMIHUDRAFT_467751
03012 Translation factors [BR:
ehx03012
]
EMIHUDRAFT_467751
Enzymes [BR:
ehx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
EMIHUDRAFT_467751
5.6.2.5 RNA 5'-3' helicase
EMIHUDRAFT_467751
Ribosome biogenesis [BR:
ehx03009
]
Eukaryotic type
Other ribosome biogenesis factors
EMIHUDRAFT_467751
Translation factors [BR:
ehx03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
EMIHUDRAFT_467751
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
R3H
SMUBP-2_HCS1_1B
Viral_helicase1
AAA_19
AAA
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
17278975
NCBI-ProteinID:
XP_005786133
JGI:
Emihu1_467751
UniProt:
A0A0D3JRC2
R1CTT0
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MCGDASSASGAADGEASTSSSSFHAASSTTAAAGTAGDAFQDALLARFHECLALERQAER
AEVDALHESLPAKELERRGLALHRLRILSTETALFGRAQLTLQLSGARPLPPTRLSPGAM
ATLRPAAAAAAAGSTCTITALRASTLTVTFEELPGEEELAEPLTLSLLHNDVTYRRLDAA
LSALRAGRLPPASAPLCRALLDGDDGAALSCGPALGATEPLPADQLVNRGLNAGQRLAVA
LIHGPPGTGKTTAVVELIRQAVLASAASNVAVDNMAERLLSGEAGGKPLRVARLLPSVLG
ASLDARLAVSDGAAIVRDVKGELSAARTQLRREGRRARAALKAEVSTLRRELAERQRRSV
RQLLEASQVVLCTNTGAAGRRDHQQLPPVVKSEEAGRRGFGVTLFERLLRGPHGAGLGVM
LTTQYRMHAAAPLMLIDTAGCDCEEDEGEGGGGANGGGTKRPSASPLVAESKSNTAEARV
VGQHVRALLAAGLRHGEIGVITPYNAQVEALREELAAERAVPSATGEGSALEVGTVDGFQ
GREKEAIVISLVRSNAQRVVGFLSENRRMNVAITRGRRHVCLVGDSDTVSATPFLARMLR
YFEEHADVRSAAQYGADAASGGRHAPSAKLAGARPPAKELLTESQAEAKLRARLQSFLAD
ASQRSHALPASLNSFERMVAHRLAAELGLEHVSTGEGKQRFVTLYKEGAAPPTGAAGAAE
EPRQGAAAVRGGEAEVEALAAAADGEARGAPSEPSAAAPAAAAAPAAPPPPLSTAPMDEV
QQQLASRVRELFTQLAAAGMPPNEAAAQAMVAAQSEAAKAEAAKAEAAKAEAAKAEAAKA
EAAKAEAAKAEAAKAEAAKAEAAKAEAAKAEAAKAEAAKAEAAKEEAAGRPAGGRPARPT
KAPQAADARAAAARAATARAAISRAAQSDGDGAAAAAAAAAAAARAAAQAESNDALREAA
LAREARQCEAEAERQAADEAVRRAMREEEEQRRKQLARAKKERRKQRKGAEDAGGGGDDD
DDVDAALAALGLAPNGASAAEPMANPTAPSALPWGRDRETERERERLQARLRQKLATGDG
SHQKRQQKKK
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggggatgcgtcctctgccagcggcgcggcggacggcgaggcctcgacctcctca
tcctccttccacgcggcctcctccaccaccgccgcggccggcactgccggcgacgccttt
caggacgcgctgctcgcgcgcttccacgaatgcctcgcgctggagcggcaggcggagcgc
gccgaggtggacgcgctgcacgagtcgctcccggccaaggagctcgagcggcgcggcctc
gcgctgcaccggctgcgcatcctctcgaccgagacggcgctcttcggccgcgcgcagctc
acgctgcagctctccggcgcgcggccgctgccgccgacgaggctctcgcccggcgcgatg
gcgacgctccgtccggcggcggcggcggcggctgccggctcgacgtgcaccatcaccgca
ctgcgcgcgagcacgctcaccgtcacgtttgaggagctgcccggcgaggaggagctcgcc
gagccgctcacgctctcgctcctccacaacgacgtcacctaccgccggctcgacgcggcg
ctctccgcgctgcgggcgggcaggctgccgcccgcctccgcgccgctctgccgcgcgctc
ctcgacggcgacgacggcgccgcgctgagctgcggccccgccctcggtgcgaccgagccg
ctgccggcggatcagctcgtcaaccggggcctgaacgcgggccagcgcctcgccgtggcc
ctcatccacgggcctcccggcaccggcaagacgacggcggtggtggagctgatccggcag
gcggtgctcgcctcggccgcctcgaacgtcgccgtcgacaacatggccgagcggctgctg
agcggagaggcaggtggcaagccgctccgggtcgcgaggctgctgccttcggtgctcggc
gcgtcgctcgacgcccgcctcgccgtctcggacggcgccgccatcgtccgcgacgtcaag
ggcgagctgtctgcggcgcgcacccagctgcggcgcgaaggcaggcgcgctcgcgccgct
ctcaaggcggaggtgtcgacgctccgccgcgagctggccgagcggcagaggcgatccgtg
aggcagctgctcgaggcgagccaggtggtgctgtgcacaaacacgggcgccgccggccga
cgcgaccaccagcagcttccgcccgtcgtcaagtcggaggaggcgggcaggaggggcttc
ggcgtcacgctcttcgagcggctcctccgcggcccgcacggagcggggctcggcgtgatg
ctcaccacgcagtaccggatgcacgcggccgcgccgctcatgctcatcgataccgcgggc
tgtgattgcgaggaggacgagggcgagggaggcggcggcgcgaacggcggaggcaccaag
cgccccagcgcctcaccgctcgtggcggagtcgaagagcaacacggccgaggcccgcgtg
gtcggccagcacgtccgcgcgctgcttgctgccgggctgcggcacggcgagatcggcgtc
atcacgccgtacaacgcgcaggtcgaggcgcttcgcgaggagctcgcggcggagcgcgcc
gtgccgtcggccacgggcgaggggtccgcgctcgaggtggggacggtggacggcttccag
gggcgcgagaaggaggcgatcgtcatctcgctggtgcgctcgaacgcgcagcgcgtcgtc
ggcttcctctcggagaaccgccggatgaacgtggcaatcacgcgcggccggcgccacgtc
tgccttgtgggagactcggacacggtctccgccacgcccttcctcgcgcgaatgctgcgc
tacttcgaggagcacgccgacgtgcgctcggcagcccagtacggcgcggacgccgcctcg
ggcggccgacacgcgccctccgccaagctggccggcgcccgccctccggccaaggagctg
ctgaccgagtcgcaggcggaggcgaagctgcgcgcgcgcctgcagagcttcctggcggac
gcgtcgcagcgctcgcacgcgctcccggcctcgctcaattcgttcgagcgcatggtggcg
caccggcttgccgcggagctcggcctcgagcacgtctcgaccggggagggcaagcagcgc
ttcgtcacgctctacaaggagggcgcggcgccgccgacgggcgcggcgggggcggcggag
gagccgcgacagggtgcggcggcagtgcgggggggagaggcggaggtcgaggcgctcgca
gcggcagcggacggcgaggcgcgcggcgcgccgtccgagccatccgccgccgcgccggcc
gccgccgctgcccccgccgccccccctccgccgctctcgacggcgccgatggacgaggtg
cagcagcagctggcctcgcgggtccgggagctcttcacgcagctggccgcggcgggcatg
ccgccaaacgaggccgcggcgcaggcgatggtcgccgcgcagtcggaggcggccaaggcg
gaggcggccaaggcggaggcggccaaggcggaggcggccaaggcggaggcggccaaggcg
gaggcggccaaggcggaggcggccaaggcggaggcggccaaggcggaggcggccaaggcg
gaggcggccaaggcggaggcggccaaggcggaggcggccaaggcggaggcggccaaggcg
gaggcggccaaggaggaggctgcgggcaggccggcggggggcaggccggcgaggccgacc
aaggcgccgcaggcagcggacgcgagggcggcggcagcgcgggccgcgacggcccgagcg
gcgatttcgcgagcggcgcagtcggacggcgatggggcggcagcagccgcggcggccgca
gcagccgcggcgagggcggccgcacaggcggagagcaacgacgcgctgcgcgaggcggca
ttggcgagggaggcgcggcagtgcgaggcggaggcggagaggcaggcggccgacgaggcg
gtgcggcgggcgatgcgcgaggaggaggagcagcggcgcaagcagctcgcgcgtgcgaag
aaggagcgccgcaagcagaggaagggcgcagaggacgctggaggcggcggcgacgacgat
gacgatgtggacgcggcgctcgccgcccttgggctggcgccgaatggcgcgagcgcagcc
gagcctatggccaatccgacggcgccatccgcgctgccgtggggccgcgaccgcgagacc
gagcgcgagcgagagcgcctccaggcaaggctgcgccagaagctcgcgactggcgacggg
tcgcaccagaagcggcagcagaagaagaagtga
DBGET
integrated database retrieval system
