Emiliania huxleyi: EMIHUDRAFT_468520
Help
Entry
EMIHUDRAFT_468520 CDS
T02915
Name
(RefSeq) ATP-dependent RNA helicase
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EMIHUDRAFT_468520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehx03041
]
EMIHUDRAFT_468520
Enzymes [BR:
ehx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EMIHUDRAFT_468520
Spliceosome [BR:
ehx03041
]
Complex C
Other components
Step II factors
EMIHUDRAFT_468520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
DEAD
AAA_22
AAA_19
AAA_30
GIPC1_GH2
nSTAND3
Helicase_C
ABC_tran
TsaE
AAA_16
PhoH
T2SSE
Sigma54_activ_2
NB-ARC
TrwB_AAD_bind
DAP3
Motif
Other DBs
NCBI-GeneID:
17274910
NCBI-ProteinID:
XP_005782064
JGI:
Emihu1_468520
UniProt:
A0A0D3K1K0
R1ESN4
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MDALLGLQRLSLVQKICSELKNHIGVDDKTLAEFIIELAQENSTLPAFMRALDENGAEFP
EDFASTLLHLVQTMAPRKRPAPSAPAASAAASSSSGPTERFSGLAIPNADPERLRKLEEE
ALGARAAVDPAIGGRPADRRPPPPPPPPGGRGGGGAGSSSGGGGGSSGAALARDFSRDAD
AAAEPGKVYAGRVTNVMDFGAFVQLSGVRGKAEGLVHVSLIQSQPLRSPHDALKRGQPCF
VKVLSTTGSKMPAKRLTSPELFEAKQLIASGVLDATEEELEIELNEAEPLFLRGQTKASV
AMSPIKIVRNPDGSLQRAAMTQSALAKERRELRDSLERRELRDSQQRALMDAIPKDANPL
EAGDDLNRPWEDPMPEPGERHIAQELRGLGYTQEAVPEWKVKSMGKGFSIGFPTKNKSIQ
EQRASLPIAALKQELVNAVAENQVLVVIGETGSGKTTQMTQFMAEAGFTSRGIIGCTQPR
RVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSPETILKYMTDGMLLRECLVDTNLSRY
SLIMLDEAHERTIHTDVLFGLLKGLLARRKDLKLICTSATLDAEKYSSYFFECPIFTIPG
RTFPVEVLYTKAPEADYMDAALITVMQIHLQEPPGDVLLFLTGQEEIDTACQILFERMKS
LGPRIFEAAPPGSRKVVIATNIAEASLTIDGIFYVVDPGFVKQKVYNAKVGMDSLVVVPI
SQASARQRRAGRTGPGKCYRLRSGFCFRALRSADRAEGATTGMLSHVSAVSGTPTHSAAS
SSAKRTGSEWEGPAAAATTSATPLQIARRRGRARGSSGAEAPPSHVATSSRHSEAGDSSS
GVGRTDHARAPKERSAGNRIDSGSASRSALQPTAE
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggacgccctcctcgggctgcagcgcctctcgctggtccagaagatctgctccgagctc
aagaaccacatcggcgtcgacgacaagacgctcgccgagttcatcatcgagctggcgcag
gagaactcgacgctgcccgccttcatgcgggcgctcgacgagaacggcgccgagttcccg
gaggactttgcgtcgacgctcctccacctcgtgcagaccatggcgccgcgcaagcgcccc
gcgccgtcggcgcccgcggccagcgccgccgcgtcgtcctcgtccgggccgaccgagcgc
ttctccgggctggcgatcccgaacgcggacccggagcggctgcggaagctggaggaggag
gccctcggcgcgcgcgcggcggtcgaccccgccatcggcggccgccccgccgatcggcgg
cctccgcctccgccgccgccgccgggcgggcgcggcggcggcggcgcgggcagcagcagc
gggggcgggggcggcagcagcggcgcggcgctggcgcgcgacttttcgcgcgacgccgac
gcggcggccgagccgggcaaggtgtacgccggccgcgtcacaaacgtgatggactttggc
gcgtttgtgcagctgagcggcgtgcgcggcaaggccgagggcctcgtgcacgtgtcgctg
atccagtcgcagccgctgcgctcgccgcacgacgcgctgaagcgcgggcagccctgcttc
gtcaaggtcctctccaccaccggctccaagatgcccgcgaagcggctgacctcgccggag
ctgttcgaggccaagcagctgatcgcgagcggcgtgctcgacgccaccgaggaggagctc
gagatcgagctcaacgaggcggagcccctcttcctccgcggccagaccaaggcctccgtc
gccatgtccccgatcaagatcgtccgcaaccccgacggctcgctgcagcgcgccgcgatg
acgcagtcggcgctggccaaggagcggcgcgagctgcgcgactcgctagagcggcgcgag
ctgcgcgactcgcagcagcgagcgctgatggacgcaatccccaaggacgccaacccccta
gaagcgggggacgacctcaaccggccgtgggaggacccgatgccggagccgggagagcgg
cacatcgcgcaggagctgcgcggcctcggctacacgcaggaggcggtgccggagtggaag
gtcaagtcgatgggcaagggcttctcgatcggtttcccgaccaagaacaagtcgatccag
gagcagcgcgcctcgctgccgatcgcggcgctgaagcaggagctggtgaacgccgtcgcg
gagaaccaggtcctcgtcgtgattggcgagacgggctccggcaagacgacgcagatgacg
cagttcatggccgaggcgggcttcacgtcgcgcggcatcatcggctgcacgcagccgcgc
cgcgtcgccgcgatgtcggtcgccaagcgagtggccgaggagtttggctgccggctgggc
caggaggttggctattcgatccggttcgaggactgcacgtcgcccgagacgatcctcaag
tacatgactgacgggatgctgctgcgcgagtgcctcgtcgacaccaacctgtcgcgctac
tcgctcatcatgctggacgaggcgcacgagcgcacgattcacactgacgtcctcttcggc
ctgctcaagggcctgctcgcccgccgcaaggacctcaagctcatctgcacttcggcgacc
ctcgacgcggagaagtactcgtcctacttcttcgagtgcccgatcttcaccatccccggc
cgcaccttcccggtcgaggtcctctacacaaaggcgcccgaggcggactacatggacgcg
gccctcatcacggtgatgcagatccacctgcaggagccgcccggcgacgtcctcctcttc
ctcacggggcaggaggagatcgacaccgcctgccagatcctctttgagcggatgaagtcg
ctcggcccgcgcatcttcgaggccgcgccgcccggctcgcgcaaggtggtcatcgcgaca
aacatcgccgaggcatccctcacgatcgacggcatcttctacgtcgtcgaccccggcttc
gtcaagcagaaggtgtacaacgcaaaggtcggcatggactcgctggtggtggtgccgatc
tcgcaggcgtcggcgcggcagcggcgcgctggccgcaccggcccgggcaagtgctaccgc
ctgaggtcgggcttttgcttcagagcgctgcgaagcgcggaccgcgccgagggcgcgacg
acgggcatgctctcccacgtgtccgccgtctccggcacgcccacgcacagcgcggcgagc
agcagcgccaagagaaccggcagcgagtgggaaggccctgccgccgccgccacgacaagc
gcgacgccgctgcaaattgcaaggcgccgggggagggcgcgcggctcctccggcgcggag
gcgccgccctcccacgtggcgaccagctcgcgccacagcgaggcgggagacagctcctcc
ggcgtcggccgaaccgaccatgcaagggcaccgaaggagaggagcgcgggcaaccgcatc
gactcgggcagtgccagtcggagtgcactgcagcctactgcggagtag
DBGET
integrated database retrieval system
