Emiliania huxleyi: EMIHUDRAFT_52759
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Entry
EMIHUDRAFT_52759 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K10570
DNA excision repair protein ERCC-8
Organism
ehx
Emiliania huxleyi
Pathway
ehx03420
Nucleotide excision repair
ehx04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
EMIHUDRAFT_52759
09124 Replication and repair
03420 Nucleotide excision repair
EMIHUDRAFT_52759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ehx04121
]
EMIHUDRAFT_52759
03400 DNA repair and recombination proteins [BR:
ehx03400
]
EMIHUDRAFT_52759
Ubiquitin system [BR:
ehx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
EMIHUDRAFT_52759
DNA repair and recombination proteins [BR:
ehx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
EMIHUDRAFT_52759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_RFWD3
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
17253763
NCBI-ProteinID:
XP_005760039
JGI:
Emihu1_52759
UniProt:
A0A0D3I8M5
R1CZ21
LinkDB
All DBs
Position
Unknown
AA seq
197 aa
AA seq
DB search
LTPRGDAVTTLSLEAIDERYLLAGCADASVALYDVADTPSAPPRGPPQPRRPVVQATRRS
CRSGHTGAVACVQWFPHDTGAFVSGGYDALVKLWDTNTMSPACDFESAGRVHCVCMSEVA
SRHNLIAACADGDDREVVLYDPNVGHAAHRLCGHRGVPWALAWSPRDEHHLVSGGSDGSL
RLWDIRKNIRGCLRSFD
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
ctgacgccacgcggcgacgcggtcacgacgctctcgctcgaggccatcgacgagcggtac
ctgctcgcgggctgcgccgacgcgtcggtcgcgctgtacgacgtggcagacacgccgagc
gcaccgccccgcggccctccgcagccgcgccgtcccgtcgtgcaggccacgcggcggtct
tgccggtcgggccacacgggcgccgtcgcgtgcgtgcagtggtttccgcacgacacgggc
gccttcgtctcgggcggctacgacgcgctcgtcaagctgtgggacacaaacaccatgagc
cccgcctgtgactttgagtcggcgggccgcgtccactgcgtctgcatgtccgaggtggcg
tcgcggcacaacctgatcgccgcgtgcgccgacggcgacgacagggaggtcgtcctgtac
gacccgaacgtcggccacgccgcccaccgcctctgcggccaccgtggtgttccgtgggcg
ctcgcctggtcgccgcgggacgagcaccacctcgtctcgggcggctccgacggctctctc
cgcctctgggacatccgcaagaacatccgcggctgcctccgctccttcgac
DBGET
integrated database retrieval system