KEGG   Emiliania huxleyi: EMIHUDRAFT_52759
Entry
EMIHUDRAFT_52759  CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K10570  DNA excision repair protein ERCC-8
Organism
ehx  Emiliania huxleyi
Pathway
ehx03420  Nucleotide excision repair
ehx04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    EMIHUDRAFT_52759
  09124 Replication and repair
   03420 Nucleotide excision repair
    EMIHUDRAFT_52759
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ehx04121]
    EMIHUDRAFT_52759
   03400 DNA repair and recombination proteins [BR:ehx03400]
    EMIHUDRAFT_52759
Ubiquitin system [BR:ehx04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     EMIHUDRAFT_52759
DNA repair and recombination proteins [BR:ehx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      EMIHUDRAFT_52759
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_RFWD3 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 17253763
NCBI-ProteinID: XP_005760039
JGI: Emihu1_52759
UniProt: A0A0D3I8M5 R1CZ21
LinkDB
Position
Unknown
AA seq 197 aa
LTPRGDAVTTLSLEAIDERYLLAGCADASVALYDVADTPSAPPRGPPQPRRPVVQATRRS
CRSGHTGAVACVQWFPHDTGAFVSGGYDALVKLWDTNTMSPACDFESAGRVHCVCMSEVA
SRHNLIAACADGDDREVVLYDPNVGHAAHRLCGHRGVPWALAWSPRDEHHLVSGGSDGSL
RLWDIRKNIRGCLRSFD
NT seq 591 nt   +upstreamnt  +downstreamnt
ctgacgccacgcggcgacgcggtcacgacgctctcgctcgaggccatcgacgagcggtac
ctgctcgcgggctgcgccgacgcgtcggtcgcgctgtacgacgtggcagacacgccgagc
gcaccgccccgcggccctccgcagccgcgccgtcccgtcgtgcaggccacgcggcggtct
tgccggtcgggccacacgggcgccgtcgcgtgcgtgcagtggtttccgcacgacacgggc
gccttcgtctcgggcggctacgacgcgctcgtcaagctgtgggacacaaacaccatgagc
cccgcctgtgactttgagtcggcgggccgcgtccactgcgtctgcatgtccgaggtggcg
tcgcggcacaacctgatcgccgcgtgcgccgacggcgacgacagggaggtcgtcctgtac
gacccgaacgtcggccacgccgcccaccgcctctgcggccaccgtggtgttccgtgggcg
ctcgcctggtcgccgcgggacgagcaccacctcgtctcgggcggctccgacggctctctc
cgcctctgggacatccgcaagaacatccgcggctgcctccgctccttcgac

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