Emiliania huxleyi: EMIHUDRAFT_558105
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Entry
EMIHUDRAFT_558105 CDS
T02915
Symbol
POLD1-2
Name
(RefSeq) putative DNA polymerase POLD1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03030
DNA replication
ehx03410
Base excision repair
ehx03420
Nucleotide excision repair
ehx03430
Mismatch repair
ehx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EMIHUDRAFT_558105 (POLD1-2)
03410 Base excision repair
EMIHUDRAFT_558105 (POLD1-2)
03420 Nucleotide excision repair
EMIHUDRAFT_558105 (POLD1-2)
03430 Mismatch repair
EMIHUDRAFT_558105 (POLD1-2)
03440 Homologous recombination
EMIHUDRAFT_558105 (POLD1-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ehx03032
]
EMIHUDRAFT_558105 (POLD1-2)
03400 DNA repair and recombination proteins [BR:
ehx03400
]
EMIHUDRAFT_558105 (POLD1-2)
Enzymes [BR:
ehx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EMIHUDRAFT_558105 (POLD1-2)
DNA replication proteins [BR:
ehx03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
EMIHUDRAFT_558105 (POLD1-2)
DNA repair and recombination proteins [BR:
ehx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
EMIHUDRAFT_558105 (POLD1-2)
MMR (mismatch excision repair)
DNA polymerase delta complex
EMIHUDRAFT_558105 (POLD1-2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DZR_2
Motif
Other DBs
NCBI-GeneID:
17279153
NCBI-ProteinID:
XP_005786311
JGI:
Emihu1_558105
UniProt:
A0A0D3KDP7
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MLPEFATPLCAGEQRAASVRFYGVTKGGNSVTAHVHGFLPYFFVRAWPGFKPEDCEPFRQ
KLNARLKSGKEPVLNPVVMVRPCQKKSIMNYSFGQQSVFLRIVTCLPSLVSTARRLLEQG
MSLPSGGAHSFETYESNWAYVMRFMVDRDIQGMSWLSLTAGKWRARPWTSEGTGHVVKKA
TTSQLEADLFFSDLVAHQPEGEWLGMAPMRILSFDIECAGRPGVFPDATQDPVIQIANHV
CLQGETKPRIKNIFTLDTCSAISGAQVLPFEKEAELLAKWQQFLVASDADIITGYNIANF
DLPYLLLRAETLKVGTFPYLGRIKGMKTRVKDKMFQSKQTGTRESKEINIEGRVQFDMLQ
VLQRDHKLSSYSLNSVCAHFLGEQKEDEDVHHSIISELQAGNADTRRRLAVYCLKDAYLP
QRLLQKLMCLINYSEMARVCGVPLNYLLTRGQQIKVMSQLYRKAKTVGCLLPAHKQGEGD
KYEGATVIEPKKGFYREPILEELLGARKKAKADMKAEKAKGKDMDPLTYAVYDGRQLALK
VSANSVYGFTGAQVGQLPCLEISSSVTGFGRQMIEETKEHVEANYNVAKGYEHDAVVIYG
DTDSVMIKFGTDSLAEAMRLGEEAAARVTQTFIQPIKLEFEKCYHPYLLMNKKRRALARC
GRLREIAGDCGRYAGLLWTSTAKHDYMDCKGIETVRRDNCELVKDVVDTSLRNILIEGEP
DKAISHVGDRIPYVMVKGAAKAKAWEKAEDPIFVLDNNIPLDTDWYLEHQLSEPIKRLFD
PLVDDVKLQVLSGEHTRKIKKVMPTTGGLMGMVTVSVRCLGCRAVLKSGGALCANCTHRE
AEVYMEKLRHLSACEKRFWQIMVQCQRITGDNYKDVLGIARDSPIYYQMKKVQKDLNEAR
ETISRFGVPV
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccgagtttgcgacgcccctctgcgccggcgagcagcgggcggcgtccgtgcgc
ttctacggcgtgaccaagggcggcaactcggtgacggcgcacgtgcacggcttcctgccc
tacttctttgtccgcgcgtggcccggcttcaagccggaggactgcgagcccttccggcag
aagctcaacgcgcggctcaaatcgggcaaagagccggtgctgaacccggtcgtgatggtg
cggccgtgccagaagaagtccatcatgaactactccttcgggcagcagagcgtcttcctc
cgcatcgtgacgtgcctcccctcgctcgtctcgacggcgcgccggctgctcgagcaaggg
atgagcctcccctccggcggcgcgcactccttcgagacgtacgagtccaactgggcctac
gtgatgcgcttcatggtcgaccgcgacatccagggcatgagctggctctctctgacggcc
ggcaagtggcgcgcgcgcccgtggacctccgaggggacggggcatgtggtcaagaaggcg
accacgtcgcagctggaggcggacctcttcttctcggacctggtcgcgcatcagccagag
ggcgagtggctcggcatggcgccgatgcggatcctctctttcgacatcgagtgcgcgggc
cggcctggcgtcttcccggacgcgacgcaggacccggtgatccagatcgccaaccacgtc
tgcctgcagggcgagaccaagccgcgcatcaagaacatcttcacgctggacacctgctcc
gccatctcgggggcgcaggtcctcccgttcgagaaggaggcggagctgctcgcaaagtgg
cagcagttcctcgtggcgagcgacgcagacatcatcacgggctacaacatcgccaacttc
gacctgccctacctgctgctgcgcgccgagacgctcaaggttggcaccttcccgtacctc
gggcgcatcaagggcatgaagacgcgcgtcaaggacaagatgttccagtccaagcagacg
ggcacgcgcgagtccaaggagatcaacatcgagggccgcgtccagtttgacatgctgcag
gtgctgcagcgcgaccacaagctctcctcgtactcgctcaactccgtgtgcgcccacttc
ctcggcgagcaaaaggaggacgaggacgtgcaccactcgatcatctctgagctccaggcc
ggcaacgcggacacgcgccgccgcctcgccgtgtactgcctcaaggacgcctacctgccg
cagcggctgctgcagaagctgatgtgcctgatcaactactccgagatggcgcgcgtctgc
ggcgtgcccctcaactacctgctcacgcgcggccagcagatcaaggtcatgtcgcagctg
taccgcaaggcaaagacggtcggctgcctgctgccggcgcacaagcagggcgagggcgac
aagtacgagggcgccaccgtgatcgagcccaagaagggcttctaccgcgagcctatcctc
gaggagctgctcggcgcgcgcaagaaggcaaaggccgacatgaaggccgagaaggccaag
ggcaaggacatggaccccctcacctacgccgtgtacgacggccgccagctcgcgctcaag
gtgtctgccaactccgtctacggcttcaccggagcgcaggtcggccagctgccgtgcctc
gagatctcgtcctcggtgaccggcttcgggcggcagatgatcgaggagacaaaggagcac
gtcgaggcgaactacaacgtcgccaaggggtacgagcacgacgcggtcgtcatctacgga
gacaccgactcggtgatgatcaagtttggcaccgacagcctcgcggaggcgatgcggctc
ggcgaggaggcggcggcgcgggtgacgcagaccttcatccagccgattaagctcgagttc
gaaaagtgctaccacccgtacctgctgatgaacaagaagcggcgcgcgctcgcccgctgc
gggagattgcgggagattgcgggagattgcgggaggtacgcgggtctgctgtggaccagc
acggccaagcacgactacatggactgcaaggggatcgagacggtgcggcgcgacaactgc
gagctggtgaaggacgtggtcgacacctcgctgcgcaacatcctgatcgagggcgagcca
gacaaggcaatctcgcacgtgggcgaccggatcccgtacgtgatggtcaagggcgcggcc
aaggccaaggcgtgggagaaggccgaggaccctatctttgtcctcgacaacaacatcccg
ctcgacacggactggtacctcgagcaccagctgtcggagccgatcaagcgcctcttcgac
ccgctcgtcgacgatgtcaagctgcaggtcctctcgggcgaacacacgcgcaagatcaaa
aaggtgatgccgaccacgggcgggctgatgggcatggtgaccgtgtcggtgcgctgcctc
gggtgcagagcggtgctcaagtcgggcggcgctctctgcgccaactgcacgcaccgcgag
gccgaggtgtacatggagaagctgcgccacctctccgcctgcgagaagcggttctggcag
atcatggtgcagtgccagcgcatcaccggcgacaactacaaggacgtgctcgggatcgct
cgcgactcgccaatctactaccagatgaagaaggtgcaaaaggacctcaacgaggcgcgg
gaaaccatctcccgcttcggagtgcccgtctag
DBGET
integrated database retrieval system
