Emiliania huxleyi: EMIHUDRAFT_558121
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Entry
EMIHUDRAFT_558121 CDS
T02915
Symbol
RFC2
Name
(RefSeq) putative replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
ehx
Emiliania huxleyi
Pathway
ehx03030
DNA replication
ehx03410
Base excision repair
ehx03420
Nucleotide excision repair
ehx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EMIHUDRAFT_558121 (RFC2)
03410 Base excision repair
EMIHUDRAFT_558121 (RFC2)
03420 Nucleotide excision repair
EMIHUDRAFT_558121 (RFC2)
03430 Mismatch repair
EMIHUDRAFT_558121 (RFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ehx03032
]
EMIHUDRAFT_558121 (RFC2)
03036 Chromosome and associated proteins [BR:
ehx03036
]
EMIHUDRAFT_558121 (RFC2)
03400 DNA repair and recombination proteins [BR:
ehx03400
]
EMIHUDRAFT_558121 (RFC2)
DNA replication proteins [BR:
ehx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
EMIHUDRAFT_558121 (RFC2)
DNA Replication Termination Factors
ELG1-RFC complex
EMIHUDRAFT_558121 (RFC2)
Chromosome and associated proteins [BR:
ehx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
EMIHUDRAFT_558121 (RFC2)
DNA repair and recombination proteins [BR:
ehx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
EMIHUDRAFT_558121 (RFC2)
Check point factors
HRAD17(Rad24)-RFC complex
EMIHUDRAFT_558121 (RFC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
nSTAND_NTPase5
AAA_16
AAA_14
Mg_chelatase
AAA_22
Rad17
AAA_5
AAA_11
DNAX_ATPase_lid
AAA_25
MipZ
nSTAND3
Viral_helicase1
AAA_28
bpMoxR
AAA_18
AAA_19
AAA_24
RuvB_N
AAA_30
RNA_helicase
IstB_IS21
AAA_lid_RFC1
AAA_3
NTPase_1
AAA_7
CbiA
AAA_33
FtsK_SpoIIIE
AAA_29
KTI12
Motif
Other DBs
NCBI-GeneID:
17255396
NCBI-ProteinID:
XP_005761768
JGI:
Emihu1_558121
UniProt:
A0A0D3IDK4
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MFGAPDTSSVVHEQPWLEKYRPREVKDIVGNEDTVGRIAVLAAQGNMPNLILSGPPGTGK
TTSVLALARALLGDAFKEAVLELNASDDRGIDVVRNRIKSFAQKKVTLPPGRHKIVVLDE
ADSMTEGAQQAMRRTMEIYSATTRFALACNQSDKIIEPIQSRCAILRYGKLSDQQVVTRL
TAVLEAEGAAYDEGGIEAVVFTAEGDMRQALNNAQATTAGFGIISNQNVFKVCDQPHPVV
IKRAIAACIAADFDAACSAVEELSNNGYSGMDVVGTLFKLVKFEEMDEGLKLDFIKEIGA
AHMRVLDGMDTLLQLTGLIGKLCLAAQQRKGAPRG
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcgcgccagacacctcctccgtcgtgcacgagcagccgtggctcgagaagtac
cgcccgcgcgaggtcaaggacatcgtcggcaacgaggacaccgtcggccgcatcgctgtc
ctcgcggcgcagggcaacatgccgaatctgatcctgtccggcccccccgggaccggcaag
accacctctgtcctcgccctcgcccgcgcgctgctcggcgacgccttcaaagaggcggtc
ctcgagctgaacgcctccgacgaccgcggcatcgacgtcgtgcgcaaccgcatcaagagc
ttcgcgcaaaagaaggtcaccctgccgcccggccgccacaagatcgtcgtcctcgacgag
gcggactcgatgaccgagggggcgcagcaggcgatgcggaggacgatggagatctactcg
gcgaccacacggttcgcgctcgcgtgcaaccagagcgacaagatcatcgagccgatccag
tcccgctgcgccatcctgcgctacggcaagctctcggaccagcaggtggtgacgcggctg
acggcggtgctggaggcggaaggcgcagcctacgacgagggcggcatcgaggcggtcgtc
ttcacggccgagggggacatgaggcaggcgctcaacaacgcgcaggcgaccactgcgggg
ttcggtatcatctcgaaccagaacgtcttcaaggtgtgcgaccagcctcaccccgtcgtc
atcaagcgagccatcgccgcgtgcatcgccgcggacttcgacgcggcttgctcggccgtc
gaggagctgtccaacaacgggtacagcgggatggacgtggtgggcacgctgttcaagcta
gtcaagttcgaagagatggacgaggggctcaagctcgacttcatcaaggagatcggcgcc
gcgcacatgcgcgtgctcgacgggatggacacgctgctgcagctgacaggcctcatcggc
aagctctgcctcgccgcgcagcagcggaagggcgcgccgcgcggctga
DBGET
integrated database retrieval system
