Emiliania huxleyi: EMIHUDRAFT_558365
Help
Entry
EMIHUDRAFT_558365 CDS
T02915
Symbol
COPB2-1
Name
(RefSeq) COPB2, beta' subunit of the coatomer
KO
K17302
coatomer subunit beta'
Organism
ehx
Emiliania huxleyi
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ehx04131
]
EMIHUDRAFT_558365 (COPB2-1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ehx04147
]
EMIHUDRAFT_558365 (COPB2-1)
Membrane trafficking [BR:
ehx04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
EMIHUDRAFT_558365 (COPB2-1)
Exosome [BR:
ehx04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
EMIHUDRAFT_558365 (COPB2-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
19046766
NCBI-ProteinID:
XP_005781864
JGI:
Emihu1_558365
UniProt:
A0A0D3J8I4
R1ES53
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MPLRLDIKRKLSSRSDRVKTVDLHPTEPWVLSSMYNGHVFIWNHTTQGLVKSFEVSPDQP
VRSAKFVARKQWIVAGSDDMQIRVYNYNTLEKIKVFEAHSDYIRCIAVHPSQPLVLSSSD
DMTIRLWDWDKGWANPLTFEGHTHYVMMVAFNPKDSNTFASASLDRSIKVWGINSPQPHF
TLEGHEKGVNCVEYFAGGDRPYLVSGADDQTVKVWDYQTKQCVQTMEGHSHNVAAVCCHP
ELPIILSGSEDGTVRIWHAHTYRQEYNFNYAYERCWSIAALKGTNNVALAYDEGTIVVQL
GNEEPIASMDSSGKMILARHNEISAVDLKKVEGHEVVDGERLMIPSKELDVCEIYPQWLS
HNSNGRFAVVTGDGEYIIYTALAWRKKAFGSALDFVWALDSGDYAVRESAVLIKLFKNFK
ETRTFKPPFQADAIYGGALLGVRSGEVTFFFDWVECRLVRRIDVQPKEVKWSESGELVVL
VCEDSLFLLRYSRDVAFAALESGQPIGEEGVDEAFELVHEVSEQVRTCVWVGECLVYTTK
AGRLNYTVGGEVVTLQHLDRPLHIVGYLPKENRIYLLDRDYAVVSYQLLLSVLNYQTAVV
RRDFVEAAAILPSIPQSEHNRIARFLEAQGFKEEALAVATDPEHRFELAVHLGKLQTAYD
ITTQQPSEARWKQLGDMALHAADLRLAEECLVRAADLGGLLLLYSSTGHAEGIDKLAELS
RKKGKLNVSFLCSFLRGRPTECLELLLSAGRAPEAAFLARTYTPSQTSRMVGLWKEQLRE
VNPKAAESIADPADYPNLFDGLELALKAEAWLGENQLHEAPASIYLDHAADNESDLLEHV
KQLEAQGEAMPPPEAAPAEEAAPAEPEEESPLGDEPDAAAAAEEEEAAAQAAQAAAEAEA
KAEAAAAAAAAAAAAEAAAPPPEEPPEEPEPPAPEPAAEGGAEEPFEEALEGVGEGEAAA
EHGASTDLDADLDAELDAELNSF
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccgcctcgacatcaagcggaagctgtcgtcgcggtcggaccgcgtcaagacg
gtcgaccttcacccgaccgagccgtgggtgctctcctccatgtacaacggccacgtcttt
atctggaaccacacgacgcaggggctggtcaagtcgtttgaggtgtcgccggaccagccg
gtgcggtcggccaagtttgtggcgcggaagcagtggatcgtcgctggctccgacgacatg
cagatccgcgtgtacaactacaacacgctcgaaaagatcaaggtgtttgaggcgcactcg
gactatatccgctgcatcgcggtgcacccgtcgcagccgctggtgctctcgtcgtcggac
gacatgacgatccggctgtgggattgggacaagggctgggccaacccgctcaccttcgag
ggccacacccactacgtcatgatggtcgccttcaacccgaaggactccaacacgttcgcg
tctgcctcgctcgaccgctcgatcaaggtgtggggcatcaactcgccgcagccccacttc
acgctcgagggccacgagaagggcgtcaactgcgtcgagtactttgccggaggcgaccgg
ccgtaccttgtctcgggagccgacgaccagacggtcaaggtgtgggactaccagaccaag
cagtgcgtgcagacgatggaggggcacagccacaacgtcgccgcggtctgctgccacccg
gagctgcccatcatcctgtccggctccgaggacggcaccgtccgcatctggcacgcacac
acgtaccggcaggagtacaacttcaactacgcgtacgagcgctgctggtccatcgccgcg
ctcaagggcacaaacaacgtcgcgctcgcgtacgacgaaggcaccatcgtcgtgcagctg
ggcaacgaggagccgatcgcctcgatggactcgagcggcaagatgatcctcgcgcggcac
aacgagatctccgccgtcgacctcaaaaaggtggagggccacgaggtcgttgacggcgag
cggctgatgatcccgtccaaggagctcgacgtgtgcgagatctacccgcagtggctctcg
cacaactccaacggccgcttcgccgtcgtgacgggcgacggcgagtacatcatctacacg
gcgctcgcgtggcgcaagaaggcgttcggctcggcgctcgactttgtgtgggcgctcgac
tcgggcgactacgcggtgcgcgagtcggcggtgctgatcaagctcttcaagaacttcaag
gagacgcgaaccttcaagccgcccttccaggccgacgccatctacggcggggcgctgctc
ggcgtgcggtcgggcgaggtgaccttcttcttcgactgggtcgagtgccgcctcgtgcgg
aggatcgacgtgcagcccaaggaggtgaagtggtctgagagcggcgagctggtcgtcctc
gtgtgcgaggactcgctcttcctgctgcgctactcgcgcgacgtcgccttcgccgcgctc
gagtcgggccagccgatcggcgaggagggggtggacgaggcgttcgagctcgtgcacgag
gtgagcgagcaggtgcgcacctgcgtgtgggtgggggagtgcctggtttacacgaccaag
gcgggccggctcaactacaccgtcggcggcgaggtggtgacgctgcagcacctcgaccgg
cctctgcacatcgtgggctacctgccaaaggagaaccggatctacctgctcgaccgcgac
tacgccgtcgtctcgtaccagctgctcctctccgtgctaaactaccagaccgccgtcgtg
cggcgcgactttgtcgaggcggccgccatcctgccgtcgatcccgcagtcggagcacaac
cggatcgcgcgcttcctcgaggcgcagggcttcaaggaggaggcgctcgccgtcgccacc
gacccggagcaccgcttcgagctcgccgtgcacttgggcaagctgcagactgcgtacgac
atcacgacgcagcaaccgtccgaggcccgctggaagcagctcggcgacatggcgctgcac
gccgccgacctgaggctcgccgaggagtgcctcgtgcgcgcggctgacttgggcgggctg
ctgctgctgtactcgtcgacggggcacgccgaggggatcgacaagctcgcggagctgtcg
cgcaagaagggcaagctcaacgtctccttcctctgctccttcctgcgcggccgcccaaca
gagtgcctcgagctgctactctccgccggacgcgcccccgaggcggctttcctcgcgcgc
acgtacacgcccagccagacgagccgcatggtcggcttgtggaaggagcagctgcgcgag
gtgaacccgaaggcggccgagtcgattgctgacccggccgactacccgaacctcttcgac
ggcctcgagctcgccctcaaggccgaggcgtggctcggcgagaaccagctgcacgaggcg
cccgcctccatctacctcgaccacgcggcggacaacgagtcggacctgctggagcacgtc
aagcagctcgaggcgcagggcgaggcgatgccgccgcccgaggctgctcctgcagaagag
gctgcacctgcagagccggaggaggagagtccgctgggcgacgagccggacgcggcggcg
gcggcggaggaggaggaggcggcggcgcaggcggcgcaggcggcggcggaggcggaggcg
aaggcggaggcggcggcggcggcggcggcggcggcggcggcggcggaggcggctgcaccc
ccgccggaggagccgccggaggagccggagccgccggcgccggagccggcggcggagggc
ggggcggaggagccgtttgaggaggcgctagagggggtgggggagggggaggccgccgcg
gagcacggcgcctccaccgacctcgacgccgacctcgacgcggagctggacgccgagctc
aactccttctga
DBGET
integrated database retrieval system
