Emiliania huxleyi: EMIHUDRAFT_56120
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Entry
EMIHUDRAFT_56120 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K03679
exosome complex component RRP4
Organism
ehx
Emiliania huxleyi
Pathway
ehx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EMIHUDRAFT_56120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehx03019
]
EMIHUDRAFT_56120
Messenger RNA biogenesis [BR:
ehx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
EMIHUDRAFT_56120
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
EMIHUDRAFT_56120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP4
KH_6
ECR1_N
Motif
Other DBs
NCBI-GeneID:
17266389
NCBI-ProteinID:
XP_005773271
JGI:
Emihu1_56120
UniProt:
A0A0D3JBF7
R1F5E5
LinkDB
All DBs
Position
Unknown
AA seq
179 aa
AA seq
DB search
VTPGEPIDAEPGCLRGHGTLMRDDGTLVATVSGVVERVNKLVSVRPLRARYHGEVGDVVI
GRIVGAKRWRADINGRQDAVLMLASINLPGGEQRRRTAEDQLNMRQFYVEHDLLSAEVQA
FFQDGASSLHTRSLKYGKLSGGSLVIVSPGLMKRLKQHFHLFEFGVAAIFGMNGYVWVS
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
gtcactccgggcgagccgatcgacgcggagcccggctgcctccgagggcacggcacgctg
atgcgcgacgacggcaccctcgtcgcgacggtctcgggtgtggtggagcgggtcaacaag
ctcgtgtcggtccgaccgctgcgggcgcggtaccacggcgaggtgggcgacgtggtaatc
ggccggattgtgggcgccaagcggtggcgcgccgacatcaacggccggcaggacgccgtg
ctcatgctcgcctccatcaacctgccgggaggagagcagcggcggaggactgccgaggac
cagctcaacatgcgccagttttacgtcgagcacgacctgctgtctgcagaggtgcaagcc
ttcttccaggacggggcctcgtcgctgcacacgcgctcgctcaagtacggcaagctctcg
ggcggctccctcgtcatcgtctcgcccggcctcatgaagcgcctcaagcagcacttccac
ctctttgagtttggcgtcgccgcaatctttggcatgaacggctacgtctgggtgtcg
DBGET
integrated database retrieval system
