Emiliania huxleyi: EMIHUDRAFT_56892
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Entry
EMIHUDRAFT_56892 CDS
T02915
Name
(RefSeq) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EMIHUDRAFT_56892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehx03019
]
EMIHUDRAFT_56892
03009 Ribosome biogenesis [BR:
ehx03009
]
EMIHUDRAFT_56892
Messenger RNA biogenesis [BR:
ehx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EMIHUDRAFT_56892
Ribosome biogenesis [BR:
ehx03009
]
Eukaryotic type
Pre-60S particles
RNases
EMIHUDRAFT_56892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
ARC6
4HB_RdRP3_N
Motif
Other DBs
NCBI-GeneID:
17252800
NCBI-ProteinID:
XP_005759079
JGI:
Emihu1_56892
UniProt:
A0A0D3I5W5
R1CWB1
LinkDB
All DBs
Position
Unknown
AA seq
180 aa
AA seq
DB search
PLFWLDLEMTGLDSRRDVILEAAMLASDSQLLRTVDGPEIVIHHADPVLAGMNEWSRQQH
DRSGLTERSRLSTTSLAAAEAALLAFVETHCPGDAKAVLAGACVYKDLEFVEVHMPRLRA
RLSHRVVDVSTVRHLAHAWYPGAARKARAALSAHAYTHRALDDVRHSIAELRYWREHCFR
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
ccactcttctggctggatttggagatgacgggtctcgacagccggcgtgacgtcatcctt
gaggcagcgatgcttgccagcgacagccagcttcttcggaccgtggatgggcctgagatt
gtcatccaccacgcggacccggtcctcgccggcatgaatgagtggagccgccagcagcac
gaccgatctgggctgactgagcgatcccgactgagcaccacgagcctcgctgcggccgag
gcggcgctgctcgcttttgtggagacgcactgccctggcgacgcaaaggctgtgcttgcg
ggcgcgtgcgtctacaaagacctcgagtttgtggaggtgcacatgccgcggctacgcgcg
cggctgtcgcatcgcgtggtggatgtgtccaccgtgaggcacctcgcccacgcgtggtac
cctggtgcggctcgcaaggcccgcgccgccctctccgcgcacgcgtacacgcaccgcgcc
ctcgacgacgttcgccacagcatcgcagagctgcgatactggcgagagcactgcttcaga
DBGET
integrated database retrieval system
