Emiliania huxleyi: EMIHUDRAFT_63180
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Entry
EMIHUDRAFT_63180 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03022
Basal transcription factors
ehx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EMIHUDRAFT_63180
09124 Replication and repair
03420 Nucleotide excision repair
EMIHUDRAFT_63180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehx03021
]
EMIHUDRAFT_63180
03036 Chromosome and associated proteins [BR:
ehx03036
]
EMIHUDRAFT_63180
03400 DNA repair and recombination proteins [BR:
ehx03400
]
EMIHUDRAFT_63180
Enzymes [BR:
ehx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
EMIHUDRAFT_63180
Transcription machinery [BR:
ehx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EMIHUDRAFT_63180
Chromosome and associated proteins [BR:
ehx03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
EMIHUDRAFT_63180
DNA repair and recombination proteins [BR:
ehx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EMIHUDRAFT_63180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
ResIII
AAA_11
DEAD
Motif
Other DBs
NCBI-GeneID:
17280622
NCBI-ProteinID:
XP_005787781
JGI:
Emihu1_63180
UniProt:
A0A0D3KHW7
R1DJY8
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MRFQVEELEVQFPYPRIYPEQYAYMVELKRSLDARGHSMLEMPTGTGKTITLLSLITSYQ
RAHPAMGKLLYCTRTIPEMEKVLEELKVLEAHRDELFGQDRKDKLFAVGLTSRRNLRVPP
KALSPQPSALGPALSPRPVGARPCLDCSSAEQVRELCSYYEALEAQGSDAALPAAVYTLE
ELKELGRGKGWCPYFLARHVISFANVVVYNYQYLLDPKISQLVSRSMQRECVVAHNIDNI
CIEVMSINFRMPTLEASPDTSETLPTPFLDSVRSPRGGAPPHRYQRLVHGLANSGALNAS
DELAANPLLPQDILLQAVPGNLRRADSFVLFLKRLVAHLKKRLQTEEVEESSRLALPATP
PPAPRRTARLLRASRTSSQSRSTLSLQVTDVSDFNPLLLVGDFATLLATYRQGFCIIIEP
YDERSPALPDPLFQFCCNDASIAMKPVFERFQSVLSGALSLLTNDSLVTTGTLSPIDMYP
KILGFEPRAVHSFAMSFSRDIILPLVVTRGADQAPLSSKFDLRSEPTTVRNYGKLLLDIA
ATVPDGVVAFFTSYSYMQQVVREWHALGILKRVLEHKLVFIETTDVLETTMALENFKRAC
DCGRGAVFLSIARGKVAEGVDFDRHYGRAVLLLGVPFQYTLGRVLRARLEFLRDTCAIDE
ADFLTFDAIRQAAQCAGRVIRGKTDYGIVVFADKRYNRADKRDKLPGWIRQFITDGSLDP
LLRPRLRSLNLSSDLAMHRARQFLRKMAQPATTARSVPSPRPRETWGGPDAPRAITCAQA
ETVSLDFEQLRRSNAYVASAATATAAITSHPLQATGQQLPDQPADQPERFAVEMDEAEAM
EIAV
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttcaggtggaggagctggaggtgcagttcccgtacccgcgcatctatcctgag
cagtacgcctacatggtcgagctcaagcgctcgctcgacgcgcgaggccactcgatgctc
gagatgcctaccgggaccggcaagaccatcacgctcctctcgctcatcacgtcgtaccag
cgggcgcaccccgcgatgggcaaactgctctactgcacgcgcacgatcccagagatggag
aaggtgctcgaggagctcaaggtgctcgaggcgcaccgcgacgagctcttcggccaagac
cgcaaggacaagctcttcgccgtcggtctcacctcgcgccgcaacctgcgcgtgcctccc
aaagccctcagccctcagccctcggccctcggcccagccctcagcccacgcccagtcgga
gcccgcccctgccttgactgctcctccgcggagcaggtgcgcgagctgtgctcgtactac
gaggcgctggaggcacagggcagcgacgcggctctcccagcggcggtgtacacgctcgag
gagctcaaggagctcgggcgtggcaagggctggtgcccgtacttcctcgcgaggcacgtg
atctcgttcgcaaacgtggtggtgtacaactaccagtacctcctcgacccgaagatctct
cagctcgtctcgcgctcgatgcagcgcgagtgcgtcgtcgcgcacaacatcgacaacatc
tgcatcgaggtcatgtcgatcaactttcggatgcccacactcgaggcctccccagacact
tccgagacacttcccacacccttcctagacagcgtgcgctccccgagaggcggtgcacca
ccgcacaggtaccagcgcctcgtgcacggcctcgcaaacagcggcgcactcaacgcaagc
gacgagctcgctgcgaacccgctgctgccgcaggacatcctcctgcaggccgtgccgggc
aacttgcgccgcgcggactcgttcgtgctcttcctgaagcggctggtggcgcacctcaag
aagcggctgcagacggaggaggtcgaggagagctcgcgcctcgcgctcccggccacgccg
ccgcctgcccctcggcgcaccgcccggctgctccgcgcgagtaggacatcgagccaaagc
cgctcaacactctctctgcaggtgacggacgtctccgacttcaacccgctgctgctcgtc
ggcgacttcgccacgctgctcgccacgtacaggcagggcttctgcatcatcatcgagccg
tacgacgagcgctcgcccgccctccccgacccgctcttccagttctgctgcaacgacgcc
tcgatcgcgatgaagccggtcttcgagcgcttccagtccgtcctaagcggggcgctttca
ttactaaccaatgactcgttggtaacaacaggcaccctgtcgcccatcgacatgtacccc
aagattctcggcttcgagccgcgcgccgtccactccttcgccatgtccttctcgcgcgac
atcatcctcccgctcgtcgtgacgcgcggcgccgaccaggcgccgctctcgtccaagttt
gacctgcgctccgagcccaccaccgtgcgcaactacggcaagctgctcctcgacatcgcc
gccaccgtgcccgacggcgtggtcgccttcttcacctcgtactcgtacatgcagcaggtc
gtgcgcgagtggcacgcgctcggcatcctcaagcgggtgctcgagcacaagctcgtcttc
atcgagacgaccgacgtgctcgagaccaccatggcgctcgagaacttcaagcgcgcgtgc
gactgcggccgcggcgccgtcttcctctcgatcgcgcgcggcaaggttgcggagggcgtc
gactttgaccgccactacgggcgcgccgtcctgctgctcggcgtgcccttccagtacacg
ctcggccgggtgctgcgcgcgcggctcgagttcttgcgagacacgtgcgccatcgacgag
gcggacttcctcaccttcgacgccatccggcaggcggcgcagtgcgccggccgcgtcatc
cgcggaaagacggactacggcatcgtcgtctttgcggacaagcggtacaaccgcgccgac
aagcgcgacaagctgccgggctggatccgccagttcatcaccgacggctcgctcgacccg
ctcctccggcctcgcctgcgctcgctcaacctctcctccgacctcgcgatgcaccgcgcg
aggcagttcctgcgaaagatggcgcagccagccaccacggcgcgcagcgtcccctcccct
cggccgcgagagacctggggaggccccgacgcgccccgcgccatcacttgcgcacaggcg
gagacggtctcgctcgactttgagcagttgcggcggtcgaacgcgtacgtcgcctccgcc
gcgaccgccaccgccgccatcacgtcgcacccgctgcaggccaccggccaacagctgccc
gaccagcccgccgaccagccggagcgattcgcagtggagatggatgaggcggaggcgatg
gagatagccgtgtga
DBGET
integrated database retrieval system