KEGG   Emiliania huxleyi: EMIHUDRAFT_63180
Entry
EMIHUDRAFT_63180  CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
ehx  Emiliania huxleyi
Pathway
ehx03022  Basal transcription factors
ehx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    EMIHUDRAFT_63180
  09124 Replication and repair
   03420 Nucleotide excision repair
    EMIHUDRAFT_63180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ehx03021]
    EMIHUDRAFT_63180
   03036 Chromosome and associated proteins [BR:ehx03036]
    EMIHUDRAFT_63180
   03400 DNA repair and recombination proteins [BR:ehx03400]
    EMIHUDRAFT_63180
Enzymes [BR:ehx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     EMIHUDRAFT_63180
Transcription machinery [BR:ehx03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     EMIHUDRAFT_63180
Chromosome and associated proteins [BR:ehx03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    EMIHUDRAFT_63180
DNA repair and recombination proteins [BR:ehx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     EMIHUDRAFT_63180
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 HBB ResIII AAA_11 DEAD
Other DBs
NCBI-GeneID: 17280622
NCBI-ProteinID: XP_005787781
JGI: Emihu1_63180
UniProt: A0A0D3KHW7 R1DJY8
LinkDB
Position
Unknown
AA seq 844 aa
MRFQVEELEVQFPYPRIYPEQYAYMVELKRSLDARGHSMLEMPTGTGKTITLLSLITSYQ
RAHPAMGKLLYCTRTIPEMEKVLEELKVLEAHRDELFGQDRKDKLFAVGLTSRRNLRVPP
KALSPQPSALGPALSPRPVGARPCLDCSSAEQVRELCSYYEALEAQGSDAALPAAVYTLE
ELKELGRGKGWCPYFLARHVISFANVVVYNYQYLLDPKISQLVSRSMQRECVVAHNIDNI
CIEVMSINFRMPTLEASPDTSETLPTPFLDSVRSPRGGAPPHRYQRLVHGLANSGALNAS
DELAANPLLPQDILLQAVPGNLRRADSFVLFLKRLVAHLKKRLQTEEVEESSRLALPATP
PPAPRRTARLLRASRTSSQSRSTLSLQVTDVSDFNPLLLVGDFATLLATYRQGFCIIIEP
YDERSPALPDPLFQFCCNDASIAMKPVFERFQSVLSGALSLLTNDSLVTTGTLSPIDMYP
KILGFEPRAVHSFAMSFSRDIILPLVVTRGADQAPLSSKFDLRSEPTTVRNYGKLLLDIA
ATVPDGVVAFFTSYSYMQQVVREWHALGILKRVLEHKLVFIETTDVLETTMALENFKRAC
DCGRGAVFLSIARGKVAEGVDFDRHYGRAVLLLGVPFQYTLGRVLRARLEFLRDTCAIDE
ADFLTFDAIRQAAQCAGRVIRGKTDYGIVVFADKRYNRADKRDKLPGWIRQFITDGSLDP
LLRPRLRSLNLSSDLAMHRARQFLRKMAQPATTARSVPSPRPRETWGGPDAPRAITCAQA
ETVSLDFEQLRRSNAYVASAATATAAITSHPLQATGQQLPDQPADQPERFAVEMDEAEAM
EIAV
NT seq 2535 nt   +upstreamnt  +downstreamnt
atgcgctttcaggtggaggagctggaggtgcagttcccgtacccgcgcatctatcctgag
cagtacgcctacatggtcgagctcaagcgctcgctcgacgcgcgaggccactcgatgctc
gagatgcctaccgggaccggcaagaccatcacgctcctctcgctcatcacgtcgtaccag
cgggcgcaccccgcgatgggcaaactgctctactgcacgcgcacgatcccagagatggag
aaggtgctcgaggagctcaaggtgctcgaggcgcaccgcgacgagctcttcggccaagac
cgcaaggacaagctcttcgccgtcggtctcacctcgcgccgcaacctgcgcgtgcctccc
aaagccctcagccctcagccctcggccctcggcccagccctcagcccacgcccagtcgga
gcccgcccctgccttgactgctcctccgcggagcaggtgcgcgagctgtgctcgtactac
gaggcgctggaggcacagggcagcgacgcggctctcccagcggcggtgtacacgctcgag
gagctcaaggagctcgggcgtggcaagggctggtgcccgtacttcctcgcgaggcacgtg
atctcgttcgcaaacgtggtggtgtacaactaccagtacctcctcgacccgaagatctct
cagctcgtctcgcgctcgatgcagcgcgagtgcgtcgtcgcgcacaacatcgacaacatc
tgcatcgaggtcatgtcgatcaactttcggatgcccacactcgaggcctccccagacact
tccgagacacttcccacacccttcctagacagcgtgcgctccccgagaggcggtgcacca
ccgcacaggtaccagcgcctcgtgcacggcctcgcaaacagcggcgcactcaacgcaagc
gacgagctcgctgcgaacccgctgctgccgcaggacatcctcctgcaggccgtgccgggc
aacttgcgccgcgcggactcgttcgtgctcttcctgaagcggctggtggcgcacctcaag
aagcggctgcagacggaggaggtcgaggagagctcgcgcctcgcgctcccggccacgccg
ccgcctgcccctcggcgcaccgcccggctgctccgcgcgagtaggacatcgagccaaagc
cgctcaacactctctctgcaggtgacggacgtctccgacttcaacccgctgctgctcgtc
ggcgacttcgccacgctgctcgccacgtacaggcagggcttctgcatcatcatcgagccg
tacgacgagcgctcgcccgccctccccgacccgctcttccagttctgctgcaacgacgcc
tcgatcgcgatgaagccggtcttcgagcgcttccagtccgtcctaagcggggcgctttca
ttactaaccaatgactcgttggtaacaacaggcaccctgtcgcccatcgacatgtacccc
aagattctcggcttcgagccgcgcgccgtccactccttcgccatgtccttctcgcgcgac
atcatcctcccgctcgtcgtgacgcgcggcgccgaccaggcgccgctctcgtccaagttt
gacctgcgctccgagcccaccaccgtgcgcaactacggcaagctgctcctcgacatcgcc
gccaccgtgcccgacggcgtggtcgccttcttcacctcgtactcgtacatgcagcaggtc
gtgcgcgagtggcacgcgctcggcatcctcaagcgggtgctcgagcacaagctcgtcttc
atcgagacgaccgacgtgctcgagaccaccatggcgctcgagaacttcaagcgcgcgtgc
gactgcggccgcggcgccgtcttcctctcgatcgcgcgcggcaaggttgcggagggcgtc
gactttgaccgccactacgggcgcgccgtcctgctgctcggcgtgcccttccagtacacg
ctcggccgggtgctgcgcgcgcggctcgagttcttgcgagacacgtgcgccatcgacgag
gcggacttcctcaccttcgacgccatccggcaggcggcgcagtgcgccggccgcgtcatc
cgcggaaagacggactacggcatcgtcgtctttgcggacaagcggtacaaccgcgccgac
aagcgcgacaagctgccgggctggatccgccagttcatcaccgacggctcgctcgacccg
ctcctccggcctcgcctgcgctcgctcaacctctcctccgacctcgcgatgcaccgcgcg
aggcagttcctgcgaaagatggcgcagccagccaccacggcgcgcagcgtcccctcccct
cggccgcgagagacctggggaggccccgacgcgccccgcgccatcacttgcgcacaggcg
gagacggtctcgctcgactttgagcagttgcggcggtcgaacgcgtacgtcgcctccgcc
gcgaccgccaccgccgccatcacgtcgcacccgctgcaggccaccggccaacagctgccc
gaccagcccgccgaccagccggagcgattcgcagtggagatggatgaggcggaggcgatg
gagatagccgtgtga

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