Emiliania huxleyi: EMIHUDRAFT_65228
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Entry
EMIHUDRAFT_65228 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ehx
Emiliania huxleyi
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehx03019
]
EMIHUDRAFT_65228
03041 Spliceosome [BR:
ehx03041
]
EMIHUDRAFT_65228
03036 Chromosome and associated proteins [BR:
ehx03036
]
EMIHUDRAFT_65228
Enzymes [BR:
ehx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EMIHUDRAFT_65228
Messenger RNA biogenesis [BR:
ehx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
EMIHUDRAFT_65228
mRNA cycle factors
Common to processing body (P body) and stress granule
EMIHUDRAFT_65228
Spliceosome [BR:
ehx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
EMIHUDRAFT_65228
Chromosome and associated proteins [BR:
ehx03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
EMIHUDRAFT_65228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
17267269
NCBI-ProteinID:
XP_005774191
JGI:
Emihu1_65228
UniProt:
R1CGV9
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
RSSGIDFASYADIPVEVELPRSMPQLTAETAPVERFDELECGRVLQRNLRLAGFEVPTPV
QAHSVPVALAGGDVISVAQTGSGETTPPPCSPPPPPPSSHLSATLAFMLPILKRLLQSGS
RKGTRGYGGAYRRGRGEPVAIRALVLAPTRELAQQIHAEAEKFAFRTGLRVCVAYGGTPF
GAQMRELERGCDILVATPGRINDMVQRGRVSLRAVQFLADRMLDMGFEPQIRSIVEEADM
PAGRRQTVMFSATFPKAVRGIANSFLVDPLMLKVGRVGGAALSVTQKVVFVAGRDKTDET
VELLQAVPGKTIVFVNTKRAADTLEAELSACGHPAASVHGDKDRSALFSQPPSLARARER
ALGDFKSGRINVLVGTDVLGRGIDVPEVTHVINYDAPDDIEDYTHRIGRTGRAGNTGLAT
TMLNAANRNIARDLLHTLTTSKQEARAPEWLADMAPLRKGGGRGRRGGGGGRGRGRRPSR
YGGGGGGGGAYRGGGGGGSRRW
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
cgatcctccggcatcgacttcgcatcgtacgccgacatcccggtcgaggtcgagctgccg
cgcagcatgccgcagctcacggcagagacggcgccggtcgagcgcttcgacgagctcgag
tgcggccgcgtcctgcagcgcaaccttcgcctcgccggctttgaggtgccgacgccggtg
caggcgcactctgtgccggtggctctcgcgggcggggacgtcatttcggtggcgcagacc
ggctccggcgagacgactccgcctccatgctctcccccccctccccccccctcttcacac
ctctccgctacgctcgccttcatgctcccgatcctcaagcggctgctgcagagcggcagt
cggaaggggacgcgcgggtacggcggcgcgtaccgccgcggcaggggggagccggtcgct
atccgcgccctggtcttggcgccgacccgcgagctcgcccagcagattcacgccgaggcg
gagaagtttgccttccgcaccggcctgcgcgtctgcgtggcgtacggcgggacgcccttc
ggtgcgcagatgcgcgagctcgagcgcggctgcgacatcctcgtcgcgacgcccggccgg
atcaacgacatggtgcagcggggccgcgtctcgctgcgcgccgtgcagtttctggccgac
cggatgctcgacatggggttcgagccgcagatccgctcaatcgtcgaggaggccgatatg
ccggctgggcggcggcagacggttatgttctccgcaaccttcccgaaggccgtgcgcggc
atcgcaaactccttccttgtcgacccgctgatgctcaaggtcggccgcgtgggcggcgcg
gcgctctccgtcacccaaaaggtcgtcttcgttgcgggccgcgacaagacggacgagacg
gtcgagctgctgcaggcggtgcccggcaagaccatcgtcttcgtcaatacgaagcgcgcc
gccgacacacttgaggccgagctgagcgcgtgcggccaccccgcggcgtcggtgcacggc
gacaaggaccgctccgccctcttctcacaacctccctctctcgcccgcgcgagagagcgc
gccctcggagacttcaagtcggggcggatcaacgtcctcgtcggcacggacgtgctcggc
cgcggcatcgacgtgcccgaggtgacgcacgtcatcaactacgacgcgcccgacgacatt
gaggactacacgcaccggatcggccgcacgggccgcgcgggcaacaccggcctcgccacc
accatgctcaacgcggccaaccgcaacatcgcgcgcgacttgctccacacgctcaccacc
tccaagcaggaggcgagggcgccagagtggctcgccgacatggcgccactcaggaaggga
ggcggccgcgggcgccgcggcggcggcggcgggcgagggcgtggcaggcgccccagccgg
tacggaggcggcggcggcggcggcggagcctaccgcggcggcgggggcgggggcagtcgc
cgctggtga
DBGET
integrated database retrieval system
