KEGG   Emiliania huxleyi: EMIHUDRAFT_66059
Entry
EMIHUDRAFT_66059  CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K14962  COMPASS component SWD2
Organism
ehx  Emiliania huxleyi
Pathway
ehx03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    EMIHUDRAFT_66059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ehx03019]
    EMIHUDRAFT_66059
   03036 Chromosome and associated proteins [BR:ehx03036]
    EMIHUDRAFT_66059
Messenger RNA biogenesis [BR:ehx03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     EMIHUDRAFT_66059
Chromosome and associated proteins [BR:ehx03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     EMIHUDRAFT_66059
    COMPASS/SET1 complex (yeast)
     EMIHUDRAFT_66059
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_EML_2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_Aladin Beta-prop_NOL10_N Beta-prop_WDR19_1st Beta-prop_ACSF4
Other DBs
NCBI-GeneID: 17263004
NCBI-ProteinID: XP_005769273
JGI: Emihu1_66059
UniProt: A0A0D3J009 R1DXG7
LinkDB
Position
Unknown
AA seq 310 aa
MEAMAAGAILSEHKGRVMSLDFNGSGELMLSTGEDDRLCVYSCQSGQLQRAVQSPRYGVG
IARFTHDPLSVICASRAGEAGGEGAHAIRYHSLHDNTYLRFFTGHTAPVLSLSVSPKDDV
FASAAADETMRTWDLRVPGCLGVLRFPGSGRRPAVSFDPEGLVLAAGVGGNQVKLFDLRF
ASKGPFATFSVPGEPRDFASICFNFDGKLMLVGTAQGAAVSIDAFKGTELQTFRGHANKM
GLPLEACFSADGAQVMSGSEDGKIWRWRTHDASLVAAQAGHRGPVTSVKCNPTRQLVASA
GEEVCLWLPA
NT seq 933 nt   +upstreamnt  +downstreamnt
atggaggcgatggcggcgggcgccatcctcagcgagcacaaggggcgggtcatgtcgctg
gacttcaacgggtctggagagctcatgctgagcacgggcgaggacgaccggctctgcgtt
tactcgtgccagagcggccagctgcagcgcgcggtgcagagcccccgatacggcgtgggc
atcgcccgcttcacgcacgacccgctctccgtcatctgtgcctcgcgcgccggcgaggcg
ggcggcgagggcgcgcacgcgattcggtaccactcgctgcacgacaacacctacctgcgc
ttcttcaccggccacacggcgccggtgctctcgctgagcgtctctccaaaggacgacgtc
tttgcttcggcggcggcggacgagacgatgcggacatgggacctgcgcgtgcccggctgc
ctgggcgtcctccgcttccccggcagcgggcgccggccagcggtctcctttgaccccgag
gggcttgtgctcgccgcgggcgtgggcggcaaccaggtcaagctcttcgacctgcggttt
gcctctaaggggccgtttgcaaccttttcggtgccgggcgagcctcgcgactttgcgtcc
atctgcttcaactttgacggcaagctgatgctggtcggcaccgcgcagggcgccgccgtc
agcatcgacgccttcaagggcaccgagctccagacctttcgcgggcacgccaacaagatg
gggctgccgctcgaggcgtgcttcagcgcggacggcgcgcaggtgatgagcgggtcggag
gacggcaagatctggcgctggcgcacgcacgacgcctcgctggttgcggcgcaggcgggc
caccgcggccccgtcacctccgtcaagtgcaacccgacgcggcagctcgtggcgagcgcc
ggcgaggaggtctgcctgtggctgcctgcttag

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