Emiliania huxleyi: EMIHUDRAFT_67391
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Entry
EMIHUDRAFT_67391 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03022
Basal transcription factors
ehx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EMIHUDRAFT_67391
09124 Replication and repair
03420 Nucleotide excision repair
EMIHUDRAFT_67391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehx03021
]
EMIHUDRAFT_67391
03400 DNA repair and recombination proteins [BR:
ehx03400
]
EMIHUDRAFT_67391
Enzymes [BR:
ehx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EMIHUDRAFT_67391
Transcription machinery [BR:
ehx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EMIHUDRAFT_67391
DNA repair and recombination proteins [BR:
ehx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EMIHUDRAFT_67391
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
EcsC
Motif
Other DBs
NCBI-GeneID:
17257523
NCBI-ProteinID:
XP_005763756
JGI:
Emihu1_67391
UniProt:
A0A0D3IJ92
R1BNR8
LinkDB
All DBs
Position
Unknown
AA seq
761 aa
AA seq
DB search
MESTADGADDTSGCRDFRRELELKQHAASRPLWVCPDGRIVLEASSPVYAQALDLLVAIS
EPVSRTRHMQEYQLTQYSLYAGASMGLRTQDITAGLERFSKCGLPEEVRAMVAECTERYG
KVKLILRNDRYYIECPGDGAAFDALLHDAQIAEMRVLRDAAEEIPDHLRAAAAHGGGGGG
AGSIVGLMGAAAFDEDEPSFSRLEHRSFEVDASKIKQVKERCNEIDWPLLEEYDFRNDAD
ASALPVELRPETRVRDYQQAALGRMFGSHRARSGIIVLPCGAGKTLVGITAAATIGRSCL
VLCNSAVSVEQWYQQFLMWTTVPKERVTKFTAGTKERLHPEACVLVSTYNMISFPGRRSK
EALEVMADVEAREWGLLLMDEVHVVPANTFLTCTIKTKSRCKLGLTATLVREDDKIGDLN
FLIGPKLYEANWLDLQAKGFIATVSCAEVWCPMTAEFFAEYLRQPVAVGRQLYAMNPSKF
RACEYLVRFHEARGDKVIVFSDNVFALKKYAIKLKRPYIYGPTPQHERMMLLEKFKSTSE
WNTLFISKVGDTSIDLPEANVIIQVASHFGARRQEAQRLGRILRPKARFAGDSTDPPPPP
LSLSRDVLHYYHYIIIITSLSLHYDTQEMFYSTKRQQFLVDQGYAFKVITNLVPDGQDEL
LYSTQRDQLDLLREVLTDATSAEAQAEDAREAAEVEKDSGGAAVYGGGGVSRKRASMSEL
SGGDGLTYAETSRRSAPAGPSQRHGVFKQIDKARQQQRGGR
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgaccgcggacggcgcggacgacacgagcggctgcagagactttcggcgcgag
ctggagctcaagcagcacgcggcgtcgcggcctctctgggtgtgtcccgacggccggatt
gtgctcgaggcgtcgtcgcccgtctatgcgcaggcgctcgacctgctcgtcgccatctcg
gagcccgtctctcggacgcggcacatgcaggagtaccagctgacgcagtactcgctgtac
gcgggtgcctcgatggggctccgcacacaggacatcaccgccggcctcgagcgcttctca
aagtgcggcttgcccgaggaggtccgcgcgatggtcgccgagtgcacagagcgctacggc
aaggtgaagctcatcctgcgcaacgaccggtactacatcgagtgccctggcgacggcgcc
gccttcgatgcgctgctgcacgacgcgcagatcgccgagatgcgcgtgctgcgagacgcc
gccgaggagatcccagaccatctccgcgccgccgccgcgcacggcggcggcggcggcggc
gcgggtagcattgtcggactgatgggcgcggcggcgtttgacgaggacgagccgtctttc
tcgcggctggagcaccgctcttttgaggtggacgcgtccaagatcaagcaggtcaaggag
cgctgcaacgagatcgactggccgctgctcgaggagtacgactttcggaacgacgccgac
gcgtcggcccttccggtcgagctgcggcccgagacgcgcgtgagagactaccagcaggcg
gcgctcggccgcatgtttggctcgcaccgcgcgcgctccggcatcatcgtgcttccgtgc
ggcgcgggcaagacgctggtcggcatcaccgccgccgccaccatcggccgctcgtgcctc
gtgctctgcaactcggccgtgtcggtggagcagtggtaccagcagttcctgatgtggacg
acggtgccgaaggagcgcgtcaccaagttcacggccggcacgaaggagaggctgcacccg
gaggcgtgcgtgctcgtctcgacgtacaacatgatctctttccccggccggcgctccaag
gaggcgctcgaggtgatggcggacgtcgaggcgcgagagtgggggctgctgctgatggac
gaggtgcacgtggttcccgccaacaccttcctcacctgcaccatcaagaccaagtcgcgc
tgcaagctcgggctcaccgcgacgctcgtgcgcgaggacgacaagatcggcgacctcaac
tttctgatcggcccgaagctgtacgaggccaactggctggacctgcaggcgaagggcttc
atcgccaccgtctcgtgcgccgaggtctggtgccccatgaccgcagagttctttgcagag
tacctccgccagccggtcgccgtcgggaggcagctctacgcgatgaacccgagcaagttc
cgtgcgtgcgagtacctcgtccgcttccacgaggcgcgcggcgacaaggtgattgtcttc
tcggacaacgtcttcgccctcaagaagtacgccatcaagctcaagcggccgtacatctac
ggcccaaccccacagcacgagcggatgatgctgctcgagaagttcaagtcgacgagcgag
tggaacacgctcttcatctccaaggtgggcgacacctccatcgacctgcccgaggccaac
gtcatcatccaagtcgcctcccactttggagcgcggcggcaagaggcgcagcggcttggc
cggatcctgcgtccaaaggcgcggtttgccggcgactccactgacccccccccccccccc
ctctcgttgtctcgagatgttctacattattatcattacatcattatcattacatcatta
tcattacattatgacacgcaggagatgttctactcgaccaagcggcagcagttcctcgtc
gaccagggctacgccttcaaggtgatcaccaacctggtccccgacgggcaggacgagctg
ctctactcgacgcagcgcgaccagctcgacctgctccgcgaggtgcttaccgacgcaact
tcggccgaggcgcaagccgaggacgcccgcgaggcggccgaggtggaaaaggactctggc
ggcgcggcggtgtacggaggaggcggcgtgtcgcggaagcgcgcgtcgatgagcgagctc
tcgggcggcgacggcctcacctatgcggagacgagccgcaggagcgcgccggcggggccg
agccagcggcacggcgtcttcaagcagatcgacaaggcgcggcagcagcagcgcggcggg
aggtag
DBGET
integrated database retrieval system
