Emiliania huxleyi: EMIHUDRAFT_69047
Help
Entry
EMIHUDRAFT_69047 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
ehx
Emiliania huxleyi
Pathway
ehx03018
RNA degradation
ehx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EMIHUDRAFT_69047
09123 Folding, sorting and degradation
03018 RNA degradation
EMIHUDRAFT_69047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehx03019
]
EMIHUDRAFT_69047
03041 Spliceosome [BR:
ehx03041
]
EMIHUDRAFT_69047
Messenger RNA biogenesis [BR:
ehx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
EMIHUDRAFT_69047
mRNA degradation factors
5'-3' decay
Lsm complex
EMIHUDRAFT_69047
Spliceosome [BR:
ehx03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
EMIHUDRAFT_69047
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
GP46
Motif
Other DBs
NCBI-GeneID:
17250972
NCBI-ProteinID:
XP_005757289
JGI:
Emihu1_69047
UniProt:
A0A0D3I0S5
LinkDB
All DBs
Position
Unknown
AA seq
77 aa
AA seq
DB search
AELIDKCIGSRIWIVMRGDKELVGTLRGFDDYVNMVLDDVTEYEITPEGKRVTKLDQILL
NGNNVALLVPGGSPNYD
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
gcagagctgatcgacaaatgcatcggctcgagaatatggatcgtgatgcgtggcgacaaa
gagctggtcggcaccttgagagggttcgacgactacgtgaacatggtcttggacgacgtg
accgaatatgagatcacccccgagggtaagcgcgtgacgaagctcgaccagatcctcctc
aacggcaacaacgtcgccctgttggtgccgggaggcagcccaaactacgactag
DBGET
integrated database retrieval system