KEGG   Emiliania huxleyi: EMIHUDRAFT_69047
Entry
EMIHUDRAFT_69047  CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
ehx  Emiliania huxleyi
Pathway
ehx03018  RNA degradation
ehx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EMIHUDRAFT_69047
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EMIHUDRAFT_69047
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ehx03019]
    EMIHUDRAFT_69047
   03041 Spliceosome [BR:ehx03041]
    EMIHUDRAFT_69047
Messenger RNA biogenesis [BR:ehx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     EMIHUDRAFT_69047
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     EMIHUDRAFT_69047
Spliceosome [BR:ehx03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    EMIHUDRAFT_69047
SSDB
Motif
Pfam: LSM GP46
Other DBs
NCBI-GeneID: 17250972
NCBI-ProteinID: XP_005757289
JGI: Emihu1_69047
UniProt: A0A0D3I0S5
LinkDB
Position
Unknown
AA seq 77 aa
AELIDKCIGSRIWIVMRGDKELVGTLRGFDDYVNMVLDDVTEYEITPEGKRVTKLDQILL
NGNNVALLVPGGSPNYD
NT seq 234 nt   +upstreamnt  +downstreamnt
gcagagctgatcgacaaatgcatcggctcgagaatatggatcgtgatgcgtggcgacaaa
gagctggtcggcaccttgagagggttcgacgactacgtgaacatggtcttggacgacgtg
accgaatatgagatcacccccgagggtaagcgcgtgacgaagctcgaccagatcctcctc
aacggcaacaacgtcgccctgttggtgccgggaggcagcccaaactacgactag

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