KEGG   Emiliania huxleyi: EMIHUDRAFT_76541
Entry
EMIHUDRAFT_76541  CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K14962  COMPASS component SWD2
Organism
ehx  Emiliania huxleyi
Pathway
ehx03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    EMIHUDRAFT_76541
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ehx03019]
    EMIHUDRAFT_76541
   03036 Chromosome and associated proteins [BR:ehx03036]
    EMIHUDRAFT_76541
Messenger RNA biogenesis [BR:ehx03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     EMIHUDRAFT_76541
Chromosome and associated proteins [BR:ehx03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     EMIHUDRAFT_76541
    COMPASS/SET1 complex (yeast)
     EMIHUDRAFT_76541
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_WDR19_1st Glyco_hydro2_C5
Other DBs
NCBI-GeneID: 17259551
NCBI-ProteinID: XP_005765823
JGI: Emihu1_76541
UniProt: A0A0D3J009 R1DXG7
LinkDB
Position
Unknown
AA seq 310 aa
MEAMAAGAILSEHKGRVMSLDFNGSGELMLSTGEDDRLCVYSCQSGQLQRAVQSPRYGVG
IARFTHDPLSVICASRAGEAGGEGAHAIRYHSLHDNTYLRFFTGHTAPVLSLSVSPKDDV
FASAAADETMRTWDLRVPGCLGVLRFPGSGRRPAVSFDPEGLVLAAGVGGNQVKLFDLRF
ASKGPFATFSVPGEPRDFASICFNFDGKLMLVGTAQGAAVSIDAFKGTELQTFRGHANKM
GLPLEACFSADGAQVMSGSEDGKIWRWRTHDASLVAAQAGHRGPVTSVKCNPTRQLVASA
GEEVCLWLPA
NT seq 933 nt   +upstreamnt  +downstreamnt
atggaggcgatggcggcgggcgccatcctcagcgagcacaaggggcgggtcatgtcgctg
gacttcaacgggtctggagagctcatgctgagcacgggcgaggacgaccggctctgcgtt
tactcgtgccagagcggccagctgcagcgcgcggtgcagagcccccgatacggcgtgggc
atcgcccgcttcacgcacgacccgctctccgtcatctgtgcctcgcgcgccggcgaggcg
ggcggcgagggcgcgcacgcgattcggtaccactcgctgcacgacaacacctacctgcgc
ttcttcaccggccacacggcgccggtgctctcgctgagcgtctctccaaaggacgacgtc
tttgcttcggcggcggcggacgagacgatgcggacatgggacctgcgcgtgcccggctgc
ctgggcgtcctccgcttccccggcagcgggcgccggccagcggtctcctttgaccccgag
gggcttgtgctcgccgcgggcgtgggcggcaaccaggtcaagctcttcgacctgcggttt
gcctctaaggggccgtttgcaaccttttcggtgccgggcgagcctcgcgactttgcgtcc
atctgcttcaactttgacggcaagctgatgctggtcggcaccgcgcagggcgccgccgtc
agcatcgacgccttcaagggcaccgagctccagacctttcgcgggcacgccaacaagatg
gggctgccgctcgaggcgtgcttcagcgcggacggcgcgcaggtgatgagcgggtcggag
gacggcaagatctggcgctggcgcacgcacgacgcctcgctggttgcggcgcaggcgggc
caccgcggccccgtcacctccgtcaagtgcaacccgacgcggcagctcgtggcgagcgcc
ggcgaggaggtctgcctgtggctgcctgcttag

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