Emiliania huxleyi: EMIHUDRAFT_77336
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Entry
EMIHUDRAFT_77336 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ehx
Emiliania huxleyi
Pathway
ehx03022
Basal transcription factors
ehx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EMIHUDRAFT_77336
09124 Replication and repair
03420 Nucleotide excision repair
EMIHUDRAFT_77336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehx03021
]
EMIHUDRAFT_77336
03400 DNA repair and recombination proteins [BR:
ehx03400
]
EMIHUDRAFT_77336
Transcription machinery [BR:
ehx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EMIHUDRAFT_77336
DNA repair and recombination proteins [BR:
ehx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EMIHUDRAFT_77336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Zn_ribbon_15
RUBY_RBDX
DZR
IBR
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-GeneID:
17252427
NCBI-ProteinID:
XP_005758707
JGI:
Emihu1_77336
UniProt:
A0A0D3I4U3
R1B9F3
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MEEDAEAEPQSYAWESELQRTWDAVEETADGSLRSAAAGSWRPGEKPSVQVGVRRGVMRA
VLLVLDCSRHAAEHDVEMKPSRLSVMCDAASDFAGRFFEQNPVSTLAVLVTRREKAEALT
QLSCNVRQHQQALRALAACAIGDASLQNALELARDTLSSVASFVSREVPPLVCLPSSRDA
GDLLASLSSIAASRVRCSVISLLAEVCIYRRIARETGGEYGVALSQPHLRELLLRLLPPR
PVCQLAPTNSLVKVGFPSRVPPGGAPALTYSAGSSKPEVRADGGFACPQCGVLHAELPTE
CPVCALKLLSATDLSKTYHHLFPLPLFKQQLGPPAALCFGCGEALPAAARNAAPATHGFT
CGACGAAFCEHCDALLHESLHACPSCEGP
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgccgaggccgagccccaatcctacgcgtgggagtcggagctgcagcgc
acctgggacgccgtcgaagagacggccgatggcagccttcgctccgccgccgctggctcc
tggcggccaggcgagaagccgagcgtgcaggtcggcgtgcggcgaggcgtgatgcgcgcc
gtgctgctggtgctggactgctcgcgtcacgccgccgagcacgacgtcgagatgaagccc
tcgcgcctctccgtcatgtgcgacgccgcgagcgactttgccggccgcttctttgagcag
aacccagtctcgacgctcgcggtgctggtcacgcggagagagaaggcggaggcgctcacg
cagctgtcgtgcaacgtgcggcagcaccagcaggcgctccgggccctcgccgcctgtgct
ataggtgacgcgtcgctgcagaacgcgctcgagctcgcccgcgacacgctctcctcggtc
gcgtccttcgtctcgcgcgaggtccctcctctcgtctgcttacccagctctcgtgacgca
ggcgacctgctcgcctcgctctcctcgatcgccgcgtcgcgcgtccgctgctccgtcatc
tccctcctcgccgaggtctgcatctacaggcgcatcgcccgcgagactggcggcgagtac
ggcgtcgctctctcccagccacacctccgcgagctgctgctgaggctgctgccgccgcgg
cccgtctgccagctcgcgccgaccaactcgctggtcaaggttggcttccccagccgcgtg
ccgccgggcggcgctccggcgctcacctactcggcgggctcctccaagcccgaggtgagg
gccgacggagggtttgcgtgccctcagtgcggcgtgctgcacgcagagcttcccaccgag
tgccctgtctgcgccctcaagctcctctcggcgacggacctctcaaagacgtaccaccac
ctcttcccgctcccgctcttcaagcagcagctcggcccgcccgccgcgctctgcttcggc
tgcggagaggcgctgcccgccgccgcgcgcaacgccgcgccggcgacgcacggcttcaca
tgcggcgcgtgtggcgccgcgttctgcgagcactgcgacgcgctgctgcacgagtctctc
cacgcgtgcccctcttgtgaaggtccttag
DBGET
integrated database retrieval system
