Emiliania huxleyi: EMIHUDRAFT_99001
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Entry
EMIHUDRAFT_99001 CDS
T02915
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EMIHUDRAFT_99001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ehx03400
]
EMIHUDRAFT_99001
Enzymes [BR:
ehx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EMIHUDRAFT_99001
DNA repair and recombination proteins [BR:
ehx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EMIHUDRAFT_99001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
17277269
NCBI-ProteinID:
XP_005784425
JGI:
Emihu1_99001
UniProt:
A0A0D3K8B1
R1F9F5
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
MAAADAFSPWSDLCVPPDALRLAPTLLSGMSFRWHPSAAGNIYVGVLSDCIYELREDDAT
VHWRVCGPADSDRARAQLREHLSLDRGVTASAWAGGGQLPVQFFHAAAALPGVRVVSVLS
RLESLVSFMGSANNNIKRNMQMVASLCANFEENRLGCDSEGAALFSFPSVAQLCSLSEER
LWELGWGYRAPRLHKLSRQLEERGGEAWLDSLARLCDEELRAELVALCGVGRKAAARCSS
AAPRSPVPVDTHCLQMARRFLLPPAARDKSFGPALYEQISACFVDLFGPLAGWAFMTLFA
GELADFRRRAAACRVETRAARRRRSGCEAEAQSAEADRAVEASSPSGKRASRYF
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggctgacgccttctcgccctggtccgacctctgcgtgccgccagacgccctc
cgcctcgcgccaactctcctctccggcatgagcttccgttggcacccgagcgcggccggc
aacatctacgttggagtcctcagcgactgcatctacgagctgcgcgaggacgacgcgacc
gtgcattggcgcgtgtgtggacctgccgacagcgaccgggcgcgcgctcagctccgcgag
cacctcagcctcgaccgcggcgtcaccgccagcgcgtgggcgggcggcgggcagctaccg
gtccagttctttcacgcggccgccgcgctgcctggcgtgcgcgtggtgagcgtgctgtcg
cgcctcgagagccttgtgtccttcatgggttcggccaacaacaacatcaagcgcaacatg
cagatggtcgcctcactatgcgcgaacttcgaggagaaccgtctcgggtgcgacagcgag
ggcgctgccctcttcagcttcccgtcggtcgcccagctgtgctcgctctcggaggagcgg
ctctgggagctggggtgggggtaccgcgcgccgcggctgcacaagctctctcgccagctc
gaggagcgcggcggcgaggcgtggctcgacagcctcgcgcggctctgtgacgaggagctc
cgcgccgagctggtcgcgctgtgcggcgtcgggcgcaaggctgcggcccgctgctcttct
gccgcacctcgcagccctgtgcccgtcgacacgcactgcctgcagatggcgcgccgcttc
ctgctgccccccgcggcccgcgacaagagcttcgggccggccctctacgagcagatcagc
gcctgcttcgtcgacctctttggacccctcgctgggtgggccttcatgactctattcgcg
ggcgagctcgcagacttccggcggcgggcagccgcctgcagagtcgagacccgcgccgcc
cggcggcggaggtcggggtgcgaggcggaggcacagagcgccgaggcggaccgagcggtc
gaggcctcgtcgccgtcggggaaacgggcctctcgttacttttga
DBGET
integrated database retrieval system
