Edwardsiella ictaluri: NT01EI_0118
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Entry
NT01EI_0118 CDS
T00912
Name
(GenBank) DNA helicase II, putative
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
eic
Edwardsiella ictaluri
Pathway
eic03420
Nucleotide excision repair
eic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NT01EI_0118
03430 Mismatch repair
NT01EI_0118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eic03400
]
NT01EI_0118
Enzymes [BR:
eic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NT01EI_0118
DNA repair and recombination proteins [BR:
eic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NT01EI_0118
MMR (mismatch excision repair)
Other MMR factors
NT01EI_0118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
DUF4391
Motif
Other DBs
NCBI-ProteinID:
ACR67373
UniProt:
C5BBD8
LinkDB
All DBs
Position
112394..114553
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AA seq
719 aa
AA seq
DB search
MDVSDLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLAVENCSPFSIMAV
TFTNKAAAEMRHRIEALIGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPARQGMWYINGKKDDGLRPQHIESYGNPVEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLHKPQILEHYRARFNNILVDEFQDTNRIQYAWIRMLAGDS
GRVMIVGDDDQSIYGWRGAQVENIQKFLDDFPGAQTIRLEQNYRSSGNILRAANALIENN
DGRLGKKLWTEDGEGEPISLYCAFNELDEARFVVNRIKAWQDNGGALKECAILYRSNAQS
RVLEEALLQAATPYRIYGGMRFFERQEIKDALAYLRLLSNRNDDAAFERVVNTPVRGIGD
RTLDVVRQTARDRQLTLWQATRALLQEQVFPGRAANALRRFLELIEALAQDSDDLPLHVQ
TDRVIRDSGLRQMYEQEKGEKGQTRIENLEELVTATRQFSYEDDDELSPLQAFLSHAALE
SGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV
GVTRAMRKLTLTYAESRRLYGKEVYHRPSRFVGELPETCVEEVRLRASVTRPVSHARMGT
PLSQSDSGYRLGQRVAHAKFGEGTIINLEGSGEHTRLQIAFKGEGIKWLVAAYARLEVL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatctgacctgcttgacagcctgaacgataaacagcgcgaggcggtagccgcg
ccgcgcagcaacctgttggtgctggccggcgcaggcagcggtaagacccgtgttctggtg
caccgtatcgcctggctattggcggtagaaaactgttcgccgttctccatcatggcggtc
acctttaccaataaggcggcggcggaaatgcggcaccgtattgaggcgttgattggcacc
agccagggggggatgtggatcggtaccttccacggtctggcacaccgcctgctgcgcgcc
caccatttagatgccggcctgccgcaggactttcaaatcctcgatagtgaagatcagctg
cgtttgctgaagcgcctgatcaaggccatgaatctggatgagaaacagtggccagcgcgc
cagggtatgtggtacatcaacggcaagaaagatgatgggctgcgcccacagcacattgaa
agttatggtaatccagtggagcaaacctggctgcgcatctatcaggcctatcaggaagcc
tgcgatcgcgcggggctggtggactttgccgagctgctgctgcgcgcgcatgagctgtgg
ctgcacaagccccagatcctggagcactatcgcgcccgctttaacaatatcctggtggat
gagttccaggataccaaccgtattcagtatgcctggatccgcatgctggccggtgacagc
ggcagggtgatgatcgtcggcgatgacgatcagtcgatctatggctggcgcggcgctcag
gtagagaacattcagaaattcctcgatgattttcccggtgcacagacgatccgcctggag
cagaactaccgctccagcggcaatatcctgcgcgcggccaacgcgctgattgaaaataac
gatgggcgtctgggtaaaaagctgtggacggaggacggtgagggcgagccgatttcactg
tactgtgcgttcaatgagctggatgaggcgcgcttcgtggttaaccgaatcaaggcctgg
caggataacggcggcgccctgaaagagtgcgccatcctgtaccgcagtaacgcccagtcc
cgcgtgctggaggaggcgctgctgcaggcggcgacaccctatcggatttatgggggaatg
cgtttcttcgagcgtcaggagatcaaggatgcgctggcctatctgcgtctgctgtccaac
cgtaacgatgacgccgcctttgagcgggtggtgaatacgccggtacgcggcatcggcgat
cggacgctggacgtggtgcgtcagacggcccgcgatcgccagcttaccctgtggcaggcg
acccgtgcgctgctgcaggagcaggtgtttccggggcgcgccgccaatgcgctgcgtcgt
tttctggaactgattgaggcgctggcgcaggacagcgacgaccttccgctgcacgtgcag
accgatcgggtgatccgtgactccgggctgcgtcagatgtatgagcaggagaagggcgag
aaaggacagacgcgcatcgaaaacctggaggagctggtgacggcaacgcgccagttcagc
tatgaggacgatgatgagctatcgccgctgcaggcgtttctgtctcatgccgcccttgag
tccggcgagggacaggccgatgcgtatcaggacgcggtacagctgatgaccctgcactcc
gccaaggggctggagtttccccaggttttcatcgttgggatggaggagggaatgttcccc
agccagatgtcgctggatgagggggggcggctggaggaggagcggcgcctggcctacgtc
ggcgtgacccgggcgatgcgtaagctgaccctgacctatgcggagagccgacgtctgtat
ggcaaagaggtgtatcaccgtccgtcacgctttgtcggcgagctgccggagacgtgcgta
gaagaggttcgcctgcgcgccagcgtgacgcgccccgtcagccatgcgcgtatgggtacg
ccgttaagccagagtgatagcggctatcgtctgggacagcgcgtcgcccatgccaaattt
ggcgagggaactatcattaacctggagggcagcggagagcatacccgtttacagattgcc
tttaagggcgagggaattaagtggctggtcgccgcgtatgcccgtcttgaggtattgtag
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