Edwardsiella ictaluri: NT01EI_0380
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Entry
NT01EI_0380 CDS
T00912
Name
(GenBank) chaperonin GroL, putative
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
eic
Edwardsiella ictaluri
Pathway
eic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NT01EI_0380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eic03019
]
NT01EI_0380
03110 Chaperones and folding catalysts [BR:
eic03110
]
NT01EI_0380
03029 Mitochondrial biogenesis [BR:
eic03029
]
NT01EI_0380
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eic04147
]
NT01EI_0380
Enzymes [BR:
eic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NT01EI_0380
Messenger RNA biogenesis [BR:
eic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NT01EI_0380
Chaperones and folding catalysts [BR:
eic03110
]
Heat shock proteins
HSP60 / Chaperonin
NT01EI_0380
Mitochondrial biogenesis [BR:
eic03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NT01EI_0380
Exosome [BR:
eic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NT01EI_0380
Exosomal proteins of other body fluids (saliva and urine)
NT01EI_0380
Exosomal proteins of breast cancer cells
NT01EI_0380
Exosomal proteins of colorectal cancer cells
NT01EI_0380
Exosomal proteins of bladder cancer cells
NT01EI_0380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ACR67621
UniProt:
C5BDK5
LinkDB
All DBs
Position
388438..390081
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGSPAITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVSAAVEELKALSVPCSDSKAIAQVGTISANADDTVGQLIAEAMEKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIATLTAGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTIIIDGVGEESAIQGRVAQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RVAAKLVDLKGINEEQNVGIKVALRAMESPLRQIVANAGEEPSVVTNNVKAGEGNYGYNA
ATEQYGDMIEMGILDPTKVTRSALQYASSVAGLMITTECMVTDLPKEEKADLGAAGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaatttggtaatgacgcccgcgtaaaaatgctgcgcggcgtg
aacgttctggcagacgcagtgaaagtgactctgggcccgaaaggtcgtaacgtggtcctg
gataaatccttcgggtctccggctatcaccaaagacggtgtatccgttgcgcgtgagatt
gaactggaagataagttcgagaacatgggcgcacagatggtgaaagaagtcgcctccaag
gcgaatgacgccgccggtgacggtaccactacggcaaccgttctggcgcaggctatcgtt
aacgaaggcctgaaagccgttgctgccgggatgaacccgatggatctgaagcgcggtatc
gataaagccgtgagcgctgccgttgaagagctgaaggcgctgtctgtgccgtgctccgat
tctaaagcgattgcacaggtgggtaccatctccgccaacgcagacgacaccgtgggccag
ctgatcgctgaagcaatggaaaaagtcggtaaagaaggcgttatcaccgttgaggaaggc
accggcctgcaggacgagctggacgtggttgaaggtatgcagttcgatcgcggctatctg
tccccgtacttcatcaacaagccggaaaccggcgccgttgagctggaaagcccgttcatt
ctgctggctgacaagaagatctccaacatccgcgaaatgctgccggtgctggaagccgtt
gccaaagccggtaagccgctgctgatcatcgccgaagacgttgaaggcgaagcgctggcg
accctggtggtcaacaatatgcgtggtatcgtgaaagtggcggcggtgaaagcgccgggc
ttcggcgatcgccgtaaggcgatgctgcaggatatcgctaccctgaccgccggtaccgtt
atctctgaagagatcggtatggagctggaaaaagcgaccctggaagatctgggtcaggct
aaacgcgtggttatcaacaaagacactaccatcatcatcgatggtgtgggcgaagagtcc
gccattcagggccgcgtggctcaaatccgtcagcagatcgaagaagcgacctctgactac
gatcgtgaaaagctgcaggagcgcgtggctaaactggctggcggcgtagccgttatcaaa
gtgggcgcggcaactgaagttgaaatgaaagagaagaaagcacgcgtagaagacgccctg
cacgcaacccgtgctgcggtggaagaaggtgtggttgccggtggtggcgtggcgctggtt
cgcgtggcggccaagctggttgacctgaaaggcatcaacgaagagcagaacgtcggtatc
aaggttgcgctgcgtgcgatggaatcaccgctgcgtcagatcgtggccaatgccggtgaa
gagccgtcagtggttaccaacaatgtgaaggccggtgaaggtaactacggctataacgcg
gcgaccgagcagtacggtgacatgatcgagatgggtatcctggatccgaccaaggtaacc
cgttctgcgctgcagtacgcctcctccgttgcaggtctgatgatcaccaccgagtgcatg
gtgaccgatctgccgaaggaagagaaagctgacctgggtgctgccggtatgggcggtatg
ggcggtatgggtggcatgatgtaa
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