Edwardsiella ictaluri: NT01EI_0475
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Entry
NT01EI_0475 CDS
T00912
Name
(GenBank) DEAD box containing helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
eic
Edwardsiella ictaluri
Pathway
eic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NT01EI_0475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eic03019
]
NT01EI_0475
03009 Ribosome biogenesis [BR:
eic03009
]
NT01EI_0475
Enzymes [BR:
eic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NT01EI_0475
Messenger RNA biogenesis [BR:
eic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NT01EI_0475
Ribosome biogenesis [BR:
eic03009
]
Prokaryotic type
rRNA helicases
NT01EI_0475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
UTP25_NTPase-like
AAA_30
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACR67710
UniProt:
C5BFC3
LinkDB
All DBs
Position
473696..475600
Genome browser
AA seq
634 aa
AA seq
DB search
MAEFETTFADLGLAAPIIEALNDLGYEKPSPIQAACIPHLLNGRDVLGMAQTGSGKTAAF
SLPLLNNIDPSLKAPQVLVLAPTRELAVQVAEAMADFSKHMHGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLSLTSLRGLVLDEADEMLRMGFIEDVETIMAQIPAE
HQTALFSATMPEAIRRITRRFMNEPQEVRIQSSVTTRPDISQSYWTVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERNGYSSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVDRISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVDNRERRLLRNI
ERTMKLTIPEVELPNAELLSARRLAKFGARVQQQLESSDLDQYRALLAKLQPEDEQDMET
LAAALLKMAQGERPLILPPDPIVERRPRREFRERDERGGDRFARRERDERGGDRPRRERR
EVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIRLFGSHSTIELPKGMPGDL
LTHFTRTRILNKPMNMQLIGDAPAREPRRERNGERGGERRSFGGRDGGRDGDRRSFGGQR
RFSDDRRGDRGFNRDSRSARSDDNGNSRRRFNDA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggctgagttcgaaactacttttgctgacctggggttagctgcacctattattgaagct
ctgaatgatttgggctatgagaagccgtcaccgattcaggcggcctgtattccccacctg
ctgaacgggcgcgatgtgctgggtatggcgcagaccggcagcggtaaaacggcggcgttc
tctctgccgctgctgaacaatatcgatccgtccctgaaagcaccgcaggttctggtgctg
gcgccgacccgtgagctggcggtacaggttgctgaagccatggcggacttctccaagcac
atgcacggcgtcaatgtggtcgccctgtacggtggccagcgttatgacgttcagctgcgc
gccctgcgccaggggccacagatcgtggtcggtacaccgggccgtctgctggatcacctg
aagcgtggtacgctgagtctgaccagcctgcgtggcctggtgctggacgaagcggacgaa
atgttgcgtatgggctttattgaagacgttgagaccatcatggcgcagatcccggcggag
catcagaccgctctgttttctgccaccatgccggaggctatccgtcgtataacccgtcgc
tttatgaatgagccgcaggaagtgcgcattcagtccagcgtgacgacccgtccggacatc
agccagagctactggacggtgtatgggatgcgtaaaaacgaagcgctagtgcgtttcctg
gaagcggaagactttgatgcggcgatcatcttcgtgcgcaccaagaacgccaccctggaa
gtggccgaagcgctggagcgtaatggctacagcagcgcggcgctgaacggcgacatgaac
caggcgctgcgtgagcagaccctggagcgtctgaaagacggtcgtctggacatcctgatc
gcgaccgatgtggccgcccgtggcctggacgtcgatcgcatcagtctggtcgtcaactac
gatatcccgatggatgccgagtcttacgtgcaccgcatcggccgtaccggtcgtgccggt
cgtgccgggcgtgcgctgctgtttgttgataaccgtgaacgtcgtctgctgcgcaacatt
gagcgcaccatgaaactgactatcccggaagtcgaactgccgaatgccgagctgctcagc
gcgcgtcgcttggctaagttcggcgctcgcgtccagcagcagctggagagcagcgatctg
gatcagtaccgtgcgctgctggctaagctgcagccggaagatgaacaggatatggaaacg
ctggctgctgcgctgctgaagatggcgcagggtgaacgtccgctgatcctgccgccagat
ccgatcgttgaacgtcgtccgcgtcgtgaattccgcgagcgcgatgagcgcggtggcgat
cgtttcgcccgtcgcgaacgcgatgagcgtggcggcgatcgtccgcgccgtgagcgccgc
gaagtcggtgatatggagctgtatcgcatcgaagtgggtcgtgacgatggtgtcgaggtt
cgtcatatcgtgggggctatcgccaacgaaggggatatcagcagccgctatatcggcaac
attcgtctgttcggttcgcactccaccatcgagctgccgaagggtatgccgggcgatctg
ctgacgcactttacccgtacccgtatcctgaacaagccgatgaacatgcagctgattggg
gatgcaccggcgcgtgagccgcgtcgcgagcgcaatggagaacgcggtggtgagcgtcgc
agctttggcggccgagacggtggtcgtgatggcgatcgccgcagctttggcggtcagcgt
cgtttctctgacgaccgccgcggcgatcgcgggttcaaccgcgatagtcgcagcgctcgc
tctgatgataacggcaacagccgtcgtcgttttaatgatgcgtaa
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