Edwardsiella ictaluri: NT01EI_0619
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Entry
NT01EI_0619 CDS
T00912
Name
(GenBank) DNA repair protein RadA, putative
KO
K04485
DNA repair protein RadA/Sms
Organism
eic
Edwardsiella ictaluri
Brite
KEGG Orthology (KO) [BR:
eic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eic03400
]
NT01EI_0619
DNA repair and recombination proteins [BR:
eic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NT01EI_0619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
DUF7125
GvpD_P-loop
RecA_N
AAA_22
SLFN-g3_helicase
Rad51
AAA_16
ABC_tran
nSTAND_NTPase5
AAA_14
nSTAND3
NTPase_1
AAA
AAA_24
cobW
AAA_5
AAA_29
Zeta_toxin
Zn_ribbon_Thio2
DZR
Viral_helicase1
PAXNEB
FBP_C
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
ACR67846
UniProt:
C5B772
LinkDB
All DBs
Position
607008..608396
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AA seq
462 aa
AA seq
DB search
MAKAVKRAFVCNECGADYPRWQGQCSACQAWNSISEVRLAAAPAAGRSARLSGYAGDAGS
LSKVQKLSEISLEALPRFSTGFTEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCRL
SQQMKTLYVTGEESLQQVAMRAHRLGLPTEGLNMLSETSIEQICLIAEQEQPKLMVIDSI
QVMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDC
SVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGEEITAGSS
VMVVWEGTRPLLVEIQALVDTSMMSNPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVF
VNVVGGVKVSETSADLALLMSLVSSLRDRPLPQDLVIFGEVGLAGEVRPVASGQERIIEA
AKHGFRRAIVPYANVPKKAIPNMTVYGVKKLSDALDILQDLA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaggcggtaaaacgggcgtttgtctgtaatgagtgcggggcggactatcctcgc
tggcaggggcagtgctcggcctgtcaggcctggaatagcatcagcgaggtacgcctggcg
gcggcgccggcggcggggcgaagcgcgcgtctgtctggctatgccggggatgccggaagc
ctgagcaaggtacagaagctgtcggagataagcctggaggcgctaccgcgtttttcgacc
ggttttaccgagtttgaccgggtgctgggcggcggcgtggtgcccggcagcgccattttg
atcggcggaaatcccggcgcaggcaagagtaccctgctgctgcagaccctgtgccgactg
tcacagcagatgaagaccctgtatgtgaccggtgaggagtcgctgcagcaggtggcgatg
cgcgcccatcgcctcggcctgccgacggagggcctgaatatgctgtcggagaccagcatc
gagcagatttgcctgatcgccgagcaggaacagccgaagctgatggtgatcgattctatc
caggtgatgcatatggccgatattcagtcttcgcccggcagcgtggcgcaggtgcgtgaa
acggcggcctatctgacgcgctttgccaagacgcgcggcgtagcgatcgttatggtcggc
cacgtcaccaaggatggctctctggccggtcccaaggtgctggagcactgcatcgactgc
tctgtgctgctcgacggcgacgccgactcgcgttttcgtaccctgcgcagccataaaaac
cgcttcggtgcggtcaatgagctgggggtcttcgccatgaccgagcagggactgcgcgag
gtcagcaacccgtcggccatcttcctcagccgcggtgaggagatcactgccggcagttcg
gtgatggtggtgtgggaggggacccgcccgctgctggtggagatccaggcgctggtggat
acctccatgatgtccaatccgcggcgggttgccgtggggctggagcaaaaccgtctggcg
attctgctggcggtgctgcatcgccacggtgggctgcagatggccgatcaggatgtcttt
gtcaacgtggtcggcggggtaaaggtaagcgagaccagcgcggatctggcgctgctgatg
tcgctggtgtccagtctacgcgaccggccgctaccgcaggatctggtgatctttggcgag
gtgggactggcgggcgaggtgcgtccggttgccagcggtcaggagcgcattattgaggcg
gccaagcacggcttccggcgggcgatagtcccctatgccaatgtgccgaagaaggcgatc
ccaaatatgacggtttacggcgtgaagaagctgtctgacgcactggatattctgcaggat
ctggcatga
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