Edwardsiella ictaluri: NT01EI_0806
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Entry
NT01EI_0806 CDS
T00912
Name
(GenBank) exodeoxyribonuclease V, gamma subunit, putative
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
eic
Edwardsiella ictaluri
Pathway
eic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NT01EI_0806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eic03400
]
NT01EI_0806
Enzymes [BR:
eic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NT01EI_0806
DNA repair and recombination proteins [BR:
eic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NT01EI_0806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ACR68027
UniProt:
C5BH91
LinkDB
All DBs
Position
802793..806179
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AA seq
1128 aa
AA seq
DB search
MFTVYHSNQLDVLTQLMAALMQGQPLETPFAREVILVQSPGMSQWLQMELARSFGIAANI
DFPLPATFIWDLFTRVLPDIPQRSAFSKDAMTWKLMWLLPQFLDRPAFAPLAHYLSDDTD
RRKHFQLAARIADLYDQYLVYRPEWLQRWEQGGLIEGLDSAQQWQAPLWVALRDYTEQLG
QPQWHRANLYQRFIQALKVSDSAPPGLPRRVFICGISALPPVYLEALRALGEHIDVHLMF
TNPCRYYWGDIQDYAFLARLQSRRRRDYLLAQRSLGDNQSALFRVPEQAAALFSEEGEQA
LSNPLLASWGKLGRDHMYLLAQHGPQEVSAFVDLAQDTLLQRIQRDMLELEDHACIAAAA
QTLQESRQKRRLASDDRSISVHVCHSPQREVEVLHDSLLDMFSADATLSARDVIVMVADI
DSYAPFIQAVFGNTPAARYLPFAISDRSARQLHPVVQALLALLDLPHSRFNAEQVLALLE
VPALAARFDIDDDGIRLLRHWVEESGIRWGLDDDAVRDLALPATGQHTWQFGLTRMLLGY
AMDSHSGEWQGVLPYDESSGTIAELAGQLAQFLAALREWRQRLGQMQTLAQWQPLCWALL
DDFFVTDADSEAVCALIEQQWLKLVEEGLASAYPETLPITVLRDELTARLDNQRISQRFL
AGPINFCTLMPMRSIPFKVVCLLGMNDGVYPRTLAPLGFDLMAGKAQRGDRSRRDDDRYL
FLEALLSAQQRLYISYIGRSVQDNSARYPSVLVSELLEYIAQSHCLAQDVDRDVDSSAER
VMAHLCHTHPRVPFDADNFDPQGEFQSYASEWLPAASGQGVEHPPFATRLAPLPMEQLTL
DMLLRFYRHPVRAFFQQRLGVSFIREESELPQEEPFTLDALSRYQINQLLLNRLIGGDEI
ETLYRQIRAAGTLPFGAFGELWWQAQCDEMTQLAQRVGDLFQPGESLEIDHTLDGCRLTG
WLPQAQASGLVRWRPAELGATDGIVLWIEHLLFCLAQGGGDSWMFGRKNTAWHFAGLDAA
QAERELVRLIEGYREGMQAPLLLTRSGWQWLKCCYDKETGQLQTTDEARLAKAHGSLLQA
WNGDAFSPGEGQDAYLQRVVRTLDDAAQRELEAQAQRFYLPLLRHNLA
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccgtttatcactccaatcaactggatgttctgacgcagctgatggcggcgctg
atgcaggggcagccgctggaaacgccctttgcgcgcgaggtgatcttggtacaaagcccg
gggatgtcccagtggctgcagatggagctggcgcgcagcttcggcattgccgccaatatc
gactttccgctgccggctacctttatctgggatctgtttacccgggtgctgccggatatt
ccgcagcgcagcgcctttagcaaagatgccatgacctggaagctgatgtggctgctaccg
cagttcctcgatcgcccggcgtttgccccgctggcgcactatctgagcgacgatacggat
cggcgcaagcattttcagctggcggctcggattgccgacctgtatgaccagtatctggtc
taccgccccgagtggctgcagcgctgggagcagggcggactgatcgaggggctggacagc
gcgcagcagtggcaggctccgctgtgggtggcgctgcgtgactataccgagcagctgggc
cagcctcagtggcaccgcgccaacctgtatcagcgcttcattcaggcgctgaaggtgagc
gacagcgcgccgccggggctgccgcgccgggtatttatctgcgggatctcggcgctgccg
ccggtctaccttgaggcgctacgcgcgctgggggagcacattgatgtacatttgatgttc
accaacccctgtcgttactactggggcgacattcaggattacgcgtttctggcacggctg
caaagccgacgccgtcgcgactatctgctggcgcagcgtagtctgggcgacaaccagagc
gcgctgtttcgtgtgccggagcaggccgctgcgctgtttagcgaggagggcgagcaggcg
ttgagtaatccgctgctggcctcctggggcaagctgggacgcgatcatatgtatctgctg
gcccagcacggcccacaggaggtcagcgcctttgttgacctggcgcaggataccctgctg
cagcgcatccagcgggatatgctggagctggaggatcacgcctgcatcgctgccgctgcg
cagacgctgcaggagagtcggcagaagcggaggctggcgtcggacgatcgcagcatcagc
gtacacgtttgccacagtccgcagcgcgaggttgaggtgctgcacgacagcctgctggat
atgttctccgccgatgcaacgctgagcgcccgcgacgtgatcgtgatggtggccgatatc
gacagctatgcgccttttattcaggccgtcttcggcaatacgccggccgcccgctacctg
cccttcgcaatctcggaccgcagcgcccgccagctgcatccggtggtacaggcgctgctg
gcgctgctcgatcttccccatagccgctttaacgccgagcaggtgctggcactgctggag
gtgccggcgctggcggcgcgctttgatatcgacgatgacggtatccggctgctgcgccac
tgggtagaggagtccgggatccgctgggggctggacgatgacgcagtgcgtgacctggcg
ctgccggcgaccggtcagcatacctggcagtttggcctgacgcgcatgctgctgggctat
gccatggacagccacagcggagagtggcagggggtgctgccctacgatgagtccagcggg
acgatcgccgagctggccggacagctggcgcagtttctggcggcgctgcgcgagtggcgt
cagcgcttggggcagatgcagacgctggcgcagtggcagccgctgtgctgggctctgctg
gatgacttttttgtcaccgacgctgacagcgaggcggtgtgtgcgctgatcgaacagcag
tggcttaagctggttgaagaggggctggcgtcggcctatcccgagacgctgccgatcacg
gtgctgcgcgacgagctgaccgcccgtctggataatcagcgcatcagtcagcgcttcctc
gccgggccgatcaacttctgcaccctgatgccgatgcgctccatcccgtttaaggtggtc
tgtctgctggggatgaacgacggcgtttatccgcgcaccctggcgccgctggggtttgat
ctgatggcggggaaagcgcagcgcggcgatcgcagccggcgtgacgatgaccgctacctg
tttctggaggcgctgctgtcggcgcagcagcgcctctatatcagctacattggtcgctcg
gtgcaggataacagcgcgcgctatcccagcgtgctggtcagcgagctgctggagtatatc
gcccaaagtcactgtctggcgcaggatgtggatcgggacgtggacagcagcgccgaacgg
gtgatggcgcacctgtgccatacgcacccgcgggtgccgtttgatgccgataacttcgat
ccgcagggcgagttccagagctatgccagtgaatggctgccggccgccagcgggcagggg
gtagagcatccaccgtttgccacccggctggcgccgctgccgatggagcaactgacgctg
gatatgctgctccgcttttaccgtcacccggtccgggccttttttcagcagcgtctgggg
gtcagcttcatccgtgaggagagtgagctgccgcaggaggagcccttcacgctggatgcg
ctcagccgctatcagatcaaccagctgctgcttaaccgcctgatcggcggcgatgagatc
gagacgctgtatcgccagatccgcgccgccgggaccctgccctttggcgcctttggcgag
ctatggtggcaggcgcagtgtgatgagatgacgcagttggcgcagcgggtcggcgatctg
ttccagccgggggagagcctggagattgaccatacgctggacgggtgtcgcctgaccggc
tggctgccgcaggcgcaggcgtcagggctggtgcgttggcgtcccgcagagctgggcgcg
acggacgggatcgtgctgtggatagagcacttgctgttctgcctagctcaggggggcggc
gacagctggatgtttgggcgcaagaatacggcatggcactttgccggactcgatgcggcg
caggccgagcgcgagctggtgcgcctgatcgagggctaccgcgaggggatgcaggcgccg
ctgctgctgacgcgcagcggatggcaatggctgaagtgctgttatgataaggaaacggga
cagctacaaacgacggacgaggcccggctcgccaaggcgcacggcagtctgctgcaggcg
tggaacggggatgccttcagtcccggagaggggcaggatgcctatctgcagcgggtggtg
cgcacgctggatgacgcggcgcagcgagagctcgaagcacaggcgcagcgcttttattta
ccgctgctgcgtcataatttggcgtga
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