KEGG   Edwardsiella ictaluri: NT01EI_0942
Entry
NT01EI_0942       CDS       T00912                                 
Name
(GenBank) type III secretion apparatus protein, YscD/HrpQ family, putative
  KO
K03220  type III secretion protein D
Organism
eic  Edwardsiella ictaluri
Brite
KEGG Orthology (KO) [BR:eic00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:eic02044]
    NT01EI_0942
Secretion system [BR:eic02044]
 Type III secretion system
  Type III secretion core apparatus
   NT01EI_0942
SSDB
Motif
Pfam: Yop-YscD_ppl_3rd Yop-YscD_ppl_2nd Yop-YscD_cpl MoCF_biosynth
Other DBs
NCBI-ProteinID: ACR68155
UniProt: C5B9Q3
LinkDB
Position
complement(934339..935538)
AA seq 399 aa
METCFKLTLLNGPLRGQALRLPTGEFTLGEDEENDLHLALESGATAALSASEQGISLTTP
TPCWVGGRPWHGDHLPLNQGIDLAGIHFVLTDSDSDAPLPKIVKRRTKSRAILLYVLFGT
LLPTLGIIGFFGYTAAPLPPTPPTPRSWLPQALKNEPGLQAIWQSNDELLLRGHCQDSGH
LAALSQRLQASGVHLQQEAVCNDTLRQALRALLNSYGYQNMIITLQDNGDATIDGDIQGN
STPLAQALDQLPGLGRWQFTDSGAQTLERLINALQTEGLLEGISARRTEHAWLLSGHITP
PQQERLNDLLQRLNHQGGANTLPLRFIGMAGGLGTEDLLPAPIAGVGGADNALYLQLSNG
MRLLPGTPLSQGMRIVQITPDGVSLAGRLRLVFIPLHSS
NT seq 1200 nt   +upstreamnt  +downstreamnt
atggagacctgtttcaagcttacgttgctcaatggccccctgcggggacaggcgctacgg
cttcccacaggtgaatttacccttggcgaggacgaagagaacgatctgcatctggcactg
gagagcggcgcgactgccgcactatcggccagcgaacaaggcatcagcctcactacgcct
accccctgctgggtaggcggccgcccctggcacggcgatcacctaccgttaaatcagggg
atcgatctcgccgggatccactttgtcctgaccgacagcgatagcgatgcaccgctgccg
aagatagtcaaacgccgcaccaagagccgcgccattctgctatatgtccttttcggcacg
ctgctgccgacgcttgggatcatcggcttctttgggtacaccgcggcgccgttgcccccc
acgccccctacgccgcgttcatggctgccacaggcactgaaaaatgagccggggctacag
gccatctggcaaagcaacgatgagctgctgctgcgcggtcactgccaggatagcggacac
ctggcagcactgagccagcgcctgcaggccagcggcgtccatctgcagcaggaggccgtc
tgcaacgatacgctacgccaggcactacgggcactgctgaatagctatggctatcaaaat
atgattatcacactgcaggataacggcgacgccaccatcgacggtgatatccaggggaat
agcactcccttggcccaggcgctggatcagctgcctggcctgggacgctggcagtttacg
gacagcggcgcccagacgctggagcggctgattaatgccctgcaaacggaggggctactg
gagggcatcagcgcacggcgcaccgagcacgcctggctgctgtcaggacacattacgccg
ccgcagcaggaacgcctgaatgatttacttcagcgcctcaaccatcagggcggggctaat
acgctccccctccgctttatcggcatggcggggggattaggcaccgaggatctcctgccc
gcgccgatcgcgggcgtcggcggcgccgacaacgccctatacctgcagttgagcaacggc
atgcggctgcttcccggcacaccgctcagccaaggcatgcgtatcgtccagattacgcct
gacggcgtctcgttggcgggccgactgcgccttgtttttatccccctacactccagttga

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