Edwardsiella ictaluri: NT01EI_0950
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Entry
NT01EI_0950 CDS
T00912
Name
(GenBank) type III secretion system effector protein
KO
K15345
secreted effector protein SseC
Organism
eic
Edwardsiella ictaluri
Brite
KEGG Orthology (KO) [BR:
eic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eic02000
]
NT01EI_0950
Transporters [BR:
eic02000
]
Other transporters
Pores ion channels [TC:
1
]
NT01EI_0950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SseC
CelTOS
SMC_hinge
Bac_DNA_binding
Motif
Other DBs
NCBI-ProteinID:
ACR68163
UniProt:
C5B9R1
LinkDB
All DBs
Position
complement(940118..941560)
Genome browser
AA seq
480 aa
AA seq
DB search
MNPITETRYTTPPLGSSGQSDRVQQQEEQPPVGSGALDLQHPLIQHHQGQGQDHRGGFQR
PPAPRQPVTLRLAEAALNRILAIFGPRVDGHPLTVSDIERTPMDAMVLAASLLGVKALGD
NANLKALALKIREQGAENLRLRQNEDLRKQVDKAVEDQAKAQKAGIFSAIVDWIVSIAEV
VSGIGKLLIGDFAGGAMDVAAGCSGLVKAACETLALIDKDHADKYQAIADVAGKVQLAFE
LAGMVVDLVSVGRGVMAGKSIAKAAETAMEGAAGEALHNAVTEGSEEAIKAAAKEIGKEV
AGQVSEEVIRNLAEQSGRFLGQGPLLKALSKEAIEKMVTQAVETAVKNALKSGGDISLEA
LTKQVVKEVQRAVIKAIIGACITSVANNAKSTTRATLQGTNGIYQGVITKERAELQKVIQ
QLMNESSFLQFMLDEFEKVKKNAQENISNLMDGAGKALSSAADAQQKSGAMLSSIAANIA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctatcacagaaacccgctataccacgccgccgctgggtagcagcggccagagc
gacagagtacaacagcaggaggaacaaccgccggttggctcaggcgcgctggatctgcag
caccccctcattcagcatcatcagggtcagggtcaggaccacaggggcgggtttcagcgc
ccgcccgccccccgccagcccgtgacactgcgccttgcggaggccgcactgaaccgcatt
ctggctatttttggcccccgcgtcgacggtcatccgctgacggtcagcgatatcgagcgc
acgccgatggacgcgatggtgctggccgcctctctgctgggggtcaaggcgctcggcgac
aatgccaatctcaaagcgctggccctgaagatccgcgaacaaggcgccgaaaacctgcgc
ctgcgccagaatgaagatctgcgaaaacaggtggataaagccgtcgaggatcaggcaaag
gcccagaaggcggggatcttctccgccatcgtagactggattgtctctatcgccgaggtg
gtcagcggcattggcaaactattaatcggcgattttgccggcggcgccatggacgtggcg
gcgggatgctccggactggtgaaagccgcctgcgaaaccctcgcgctgatcgataaggac
catgcggacaaatatcaggccattgccgacgtcgccggcaaggtgcagctggccttcgag
ctcgccggcatggtcgtcgatctggtcagcgtcgggcgcggggtcatggcgggtaagtct
atcgccaaagcggcggaaaccgccatggagggagcggccggtgaggcgctgcataacgcc
gtgaccgaaggcagcgaggaggcgatcaaggccgcagccaaagagataggcaaggaggtt
gccggacaggtctccgaagaggtcatccgcaacctggccgagcagagcggccgcttcctg
ggccagggacctctcctgaaggccttaagcaaagaggccattgagaaaatggtcacgcag
gcggtagaaaccgcggtgaaaaatgcgctcaaatccggcggcgacatatcgctcgaagcg
ctgaccaagcaggtcgttaaagaggtacagcgcgcggtcatcaaagccatcatcggtgcc
tgtatcaccagcgtggccaataacgcgaagtcgaccacccgcgccaccctgcagggcact
aacggcatctaccagggggttatcaccaaggagcgggccgagctccagaaggttatccag
cagctgatgaatgagagcagctttttgcagttcatgctggatgagtttgaaaaagtcaaa
aaaaatgcccaagagaatatcagcaacctgatggacggagcaggcaaagccctctcctct
gcggcagacgcccagcaaaagagcggcgccatgctcagcagcatcgccgccaatatcgca
tga
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