Edwardsiella ictaluri: NT01EI_1108
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Entry
NT01EI_1108 CDS
T00912
Name
(GenBank) DNA polymerase III subunit tau, putative
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
eic
Edwardsiella ictaluri
Pathway
eic03030
DNA replication
eic03430
Mismatch repair
eic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NT01EI_1108
03430 Mismatch repair
NT01EI_1108
03440 Homologous recombination
NT01EI_1108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eic03032
]
NT01EI_1108
03400 DNA repair and recombination proteins [BR:
eic03400
]
NT01EI_1108
Enzymes [BR:
eic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NT01EI_1108
DNA replication proteins [BR:
eic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NT01EI_1108
DNA repair and recombination proteins [BR:
eic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NT01EI_1108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_4
AAA
RuvB_N
AAA_22
AAA_5
AAA_18
AAA_2
AAA_14
AAA_assoc_2
ResIII
TsaE
PIF1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ACR68319
UniProt:
C5BCZ8
LinkDB
All DBs
Position
1103117..1105075
Genome browser
AA seq
652 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGVCDNCREIEQGRFVDLLEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFHLRALDH
EQIRAQLEKIAHAEALTAEPRALQLLARAAEGSMRDALSLMDQAIAMGQGQITADTVSQM
LGTLDDEQPLALIEALTAADGALVMARVEQAAGRGVDWENLLVEMLALLHRVAMLQLLPS
ALDSQFAAVEPRLRELARMLPPADLQLFYQIILNGRKELAFAPDRRMGAEMTLLRALAFH
PKAVIAELSSAPSAVQGSDILTVSAAAVQGVVSPAPEPTVMLQTVNVPAAGAVPESTAQL
LQARSRLRQKAAGGSEPKKSEPAALQRAQPASSALERLASISERGQQKIASAEQEQASAR
KEAYRWKAQNRPVEKKAPKTTPRALRSALEHEKTPELAERLAQESLTRDEWARELSQLRL
PKLVQQLALNAFREPAPEGSVLLHLRSAQRHLNSASAQQMLAQALSGHYGHPVALSIVED
DDPQRRTPLEWRQAIYEESLAQARASIAADGNIQTLRRLFDAELDEESIRPV
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagctaccaggttctcgcccgcaagtggcgtccacaaacctttgctgacgtcgtgggt
caggagcatgtcctgacggcactggcaaacgggctctctctgggccgtattcaccatgcc
tatctgttttccggtacccgcggggtcggcaagaccagtatcgcccgtctgttggccaag
gggctgaactgtgaaaccgggatcaccgccacgccgtgcggcgtctgcgacaactgtcgg
gagatcgagcaggggcgttttgtcgacctgctggagatcgatgctgcctcgcgcaccaag
gtcgaagacacgcgtgacctgctggataacgtgcagtatgccccggcgcgcggtcggttc
aaggtctacctgatcgacgaagtccacatgctgtcgcgccacagcttcaacgcgctgttg
aaaacgctggaggagccgccgccgcacgtcaagtttctgctggctaccaccgatccacag
aagctgccggtcaccatcctgtcgcgctgtctgcagtttcatctgcgtgcgctggatcat
gagcagatccgggcgcagctggagaaaatcgcccatgccgaggccctgacggcggagccg
cgggcgctacagctgctggcacgcgccgccgaaggcagcatgcgtgatgctctgagcctg
atggatcaggcgatcgccatggggcaggggcagattaccgccgataccgtcagccagatg
ctgggaacgctggatgatgagcagcccctggcgctgatcgaggcgctgaccgcggcggat
ggcgcgctggtgatggcgcgggtagagcaggccgccgggcgcggcgtggactgggagaac
ctgctggtcgagatgctggcgctgctgcaccgggttgcgatgctacagctgctgcccagc
gcgctggacagccagttcgcggcggtagaaccgcgtctgcgtgagctggcgcggatgctg
ccgccggcggacctgcagctgttttaccagattatcctcaacggccgtaaagagctggcc
tttgcgccggaccggcgcatgggggctgaaatgaccctgctgcgtgcgctggcctttcat
cctaaggcggtgattgccgagctgagctccgcgccgtcagcggtgcagggcagcgatatc
ctcacggtctccgccgcggcggtgcagggcgtcgtgtcgccggcgcccgagccgactgtg
atgcttcagacagtgaatgtaccggcggcgggcgccgtgccggagagcactgcgcagcta
ttacaggcccgctcacgcctgcggcaaaaggccgccggagggagtgagccaaaaaagagt
gagccggcggcactgcagcgtgcgcagccggcctcttcagcgctggagcgtctggccagc
ataagcgaacggggtcagcagaagatcgcgtcggcggagcaagagcaggcgtcggcgcgt
aaagaggcttatcgctggaaggcacagaaccgccccgtagagaaaaaggcgcccaagacg
acgcccagggcgttgcgcagcgcactggagcatgagaaaacgccggagctggcggagcgc
ctggcgcaggagtcgctgacgcgggatgagtgggcccgggagctgagtcagctgcggctg
ccaaagctggtgcagcagctggcgctgaatgcgtttcgtgagcccgcaccggagggaagt
gtgcttctgcatttacgttcagcccagcgtcatttaaactccgcctctgcgcagcaaatg
ctggcgcaggccctgagcggccactatgggcatccggtggctctgagcattgtcgaggat
gacgatcctcaacgacgcacgccgctggagtggcgccaggctatctatgaagagagtttg
gcgcaggcccgcgcatcgattgcagcggatggcaatatccagaccctgcggcgtctgttc
gatgccgagctggatgaagagagcatccgccccgtttaa
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