Edwardsiella ictaluri: NT01EI_1181
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Entry
NT01EI_1181 CDS
T00912
Name
(GenBank) exonuclease SbcC, putative
KO
K03546
DNA repair protein SbcC/Rad50
Organism
eic
Edwardsiella ictaluri
Brite
KEGG Orthology (KO) [BR:
eic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eic03400
]
NT01EI_1181
DNA repair and recombination proteins [BR:
eic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NT01EI_1181
Archaeal homologous recombinant proteins
NT01EI_1181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
nSTAND3
ABC_tran
cobW
ABC_ATPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACR68389
UniProt:
C5BHP5
LinkDB
All DBs
Position
complement(1172295..1175996)
Genome browser
AA seq
1233 aa
AA seq
DB search
MRILSLRFKNINSLRGEWKIDFSAPPFCDSGLFAITGATGAGKTTLLDAICLALYHQTPR
LDTISASQNELMTRGTAESLAEVEFEVKGIGYRAFWSQRRANNRPDGKLQAVRAELARLD
DGTILCDKISDKLKTIAELTGLDFGRFTKSMMLSQGQFAAFLNADAGKRAELLEELTGTE
IYGRLSEAVFARFKQAKSDLDTLRERAAGVELLSEAQREALQASLTHARAQEQALRDQLT
QAQQQQSWLRRQQERRQALSLAQTQAAQAEQHWIALQPQLLRLTHAEPALRLRPYYQSLT
QAEEDLRQADAQQQLLEARLQTEAAQRAPLQQALQQAQHAWQQLRQHRDETQALIAEQVL
PLDNALGKQEEAGQRLSQQWQESQRQLQDLQAQLQQLSAQQAAQRQQQATLQRQLDADRQ
HAQWGERLPRWQMLLEHHGVLSDDGRRLTAERERLQQEIQLLVQQRDARQETLFGLQQDE
QRLRQALETQEAELRAWQHRHPAEQVAQARTTLQQGDDDRQQLIALQPLALQEMARIQAL
QARDGALQRERLILEQQLAEKRRQYADKRQHLQDLEQQIALQMRLISLETDRASLREGEP
CPLCGARDHPLAASYQPPALSDSQRRRDRLSQEVERLGREGGALNERAAQTTAQCIQLES
EAQQLLQTLTQQRARWQQICDALGLALTLEDETALADYLQRCAQRRRELDTLQAQGETLA
QRLQLARDDLTQACGRLSQEQHAQNLLLQTLQTQETRRGESEHQLQQLQQAQQALTRQID
DDLADSGLMAPDAAQSEYWLAARRSEWQRWQQAQEQRQSLQTQSLSVDQQVHLLLQQLTT
QTRHHEALTHERQTLDEQQLLLLAQRRALLDGRPIADVQAELLRQEQALEQRQSAALTES
QRWQQQYERLEGELNAARQQQQTRTQRLLPLRQRWQSALADSPFSDDAALLAAMLTEEEQ
QQLTALRDDAQRQRQQSVALLEQAQQAVAQGEAARPQELHTDDDDPWLEQRCSALTQQLR
QHSLQQGELQQQLHSDTQRRHSQQGWLAEIAQHERAYQDWSHLNQLIGSSSGDKFRKFAQ
GLTLDHLVYLANRQLMRLHGRYQLLRREGDTLELEVVDTWQADARRDTRTLSGGESFLVS
LSLALALSDLVSHKTRIDSLFLDEGFGTLDAETLDTALDALDTLNASGKTIGVISHVEAM
KERIPLQIRVKKINGLGFSRLDSRYRISGDGEP
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcctcagtctacgctttaagaacatcaactcgctgcgcggcgagtggaaaatt
gacttcagcgccccccccttctgcgatagcggcctgttcgccattaccggcgccaccggc
gcgggaaaaaccaccctgctggacgccatctgcctggcgttgtaccaccagaccccacgt
ctggacaccatctccgccagccaaaatgagctgatgacccgcggcaccgccgaatccctg
gccgaggtggagtttgaggtcaaggggataggctaccgcgccttttggagccagcggcgt
gccaacaaccgccccgacggcaagctgcaggcggtacgcgccgagctggcgcgactggat
gacggtacgatcctgtgcgataaaatcagcgataagctaaaaaccatcgccgagctgacc
ggtctggactttggccgctttaccaagtcgatgatgctgtcgcaggggcagttcgccgcg
tttctcaacgccgatgcgggcaaacgcgccgagctgctggaagagctgaccggtaccgag
atctacggccgcctctccgaggcggtcttcgcccgctttaagcaggccaagagcgatctg
gatacactgcgcgaacgcgccgccggcgttgaactgctcagcgaggcccagcgggaggcg
ctgcaagccagcctgacccacgcccgggcgcaggagcaggcgctgcgcgatcagctgacg
caggcgcagcagcagcagtcctggctacgacgccagcaggagcggcgccaggcgctgagc
ctggcgcagacgcaggccgcacaggccgagcagcactggatcgcccttcagccgcagctg
ctgcggctgacccacgccgaacccgcgctgcggctgcggccgtattaccaaagcctgacg
caggccgaggaggatctgcgccaggccgacgcccaacagcagctgctggaggcgcgtcta
cagacggaggcagcccagcgggctccgctgcagcaggcgctacagcaggcccagcacgcc
tggcagcagctgcgccagcaccgtgacgaaacgcaggcgctgatcgccgaacaggtactg
ccgctggacaatgcgctgggcaaacaggaggaggccgggcagcggctgtcacagcagtgg
caggagagtcagcgccagctacaggatctgcaggcgcagctacagcagctcagcgctcag
caggcggcccagcgacagcagcaggccacgctgcagcggcagctggacgccgaccggcag
cacgcccagtggggcgaacggctgccgcgctggcaaatgctgctggagcaccacggtgta
ctcagcgacgacggacgacggctgaccgccgagcgggagcggctgcagcaggagatacag
ctgctggtacagcagcgcgatgcacgccaggagactctgtttggcctgcagcaggacgaa
caacgcctgcgtcaggcgctggagacgcaggaggccgagctgcgggcgtggcagcaccgc
caccccgccgaacaggtcgcgcaggcgcgtacgaccctgcagcaaggcgatgacgatcgc
cagcagctgatcgcactgcaaccgctggccctgcaggagatggcccgcatacaggcgctg
caggcgcgcgatggtgcgctgcagcgcgagcggctgatcctggagcagcagctcgcggag
aagcggcgtcagtacgcagacaagcgccagcacctgcaggatctggagcagcagatagcg
ctgcagatgcgactgatcagcctggaaacggatcgcgccagcctgcgcgagggcgaaccc
tgcccgctgtgcggcgcacgcgatcacccgctggcggccagctaccagcccccggcgctc
agcgacagccaacggcgccgcgatcgcctcagccaggaggtcgagcgcctgggacgggaa
ggcggcgcgctgaacgagcgcgccgcccaaaccacggcgcagtgcatccagctggaaagc
gaagcccaacagctgctgcagacgctgacccagcagcgcgcgcgctggcaacagatctgt
gacgcgctggggctagccctgacgctggaggatgagacggccctcgccgactacctgcag
cgctgcgcccaacggcgccgcgagctggacactctgcaggcccagggtgagactctggca
cagcgcctgcagctggcacgcgatgacctgacccaggcctgtgggcgactgagccaggag
cagcatgcgcaaaatctgctgctgcagacgctgcaaacccaggagacccgccgcggtgag
agtgaacaccagctgcagcaactgcagcaggcacagcaggcgctcacccgacagatagac
gacgacctggctgacagcggactgatggcgcccgacgccgcacagagcgagtactggctg
gcggcgcggcgcagcgagtggcagcgttggcagcaggcgcaggagcagcgccagtcgctg
cagacccagtcgctcagcgtagatcagcaggtacacctgctgctgcagcagctgacgaca
cagacgcgacaccacgaggcgctgacgcacgagcgccagacgctggatgaacagcagctc
ctgctgctggcccagcggcgcgccctgctcgacggccgcccgatcgcagacgttcaggcc
gagctgctgcgccaggagcaggcgctggagcagcgccagagcgctgcgctgacggagagt
cagcgctggcagcagcagtatgagcgactggagggcgagctgaacgccgcccgccagcaa
cagcagacgcggacccagcgcttgctgccgctgcgtcagcgctggcagtccgcactggcc
gattcaccgtttagcgacgatgcagcactgctggccgcgatgctgacggaagaggagcag
cagcaactcacagcgctgcgcgacgacgcccagcgccagcgccagcaaagcgtagccctg
ctggagcaggcgcagcaggccgttgcccagggagaggcggcccgcccgcaggaattgcac
accgacgacgatgacccgtggctggagcagcgctgtagcgcgctgacgcagcaactgcgt
cagcacagcctgcagcagggcgagctgcagcaacagctgcacagcgatacccagcggcgc
cacagccagcagggctggctggccgagattgcccagcacgaacgggcgtatcaggactgg
agccacctcaatcagctgatcggttccagcagcggcgacaagttccgcaagtttgcccag
gggctgacgctggaccatctggtctatctggccaaccgccagctgatgcgcctgcatggg
cgctatcagctgctgcgccgggagggcgacaccctggagctggaggtcgtcgatacctgg
caggcggatgcgcgacgtgatacccgcaccctctccggcggcgaaagctttctggtcagc
ctgtctctggctctggcgctgtcggatctggtcagccacaagacccgcatcgactcactg
tttctggatgagggatttggcacgctggatgccgaaacgctggataccgcgctggacgcg
ctggataccctgaacgccagcggcaaaaccatcggcgtcatcagccacgtcgaggcgatg
aaagagcggattccgctgcagatccgggtgaagaaaatcaacgggttgggcttcagccga
ctcgacagtcgctatcgcatcagcggcgacggggagccataa
DBGET
integrated database retrieval system
