Edwardsiella ictaluri: NT01EI_1182
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Entry
NT01EI_1182 CDS
T00912
Name
(GenBank) exonuclease SbcD, putative
KO
K03547
DNA repair protein SbcD/Mre11
Organism
eic
Edwardsiella ictaluri
Brite
KEGG Orthology (KO) [BR:
eic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eic03400
]
NT01EI_1182
DNA repair and recombination proteins [BR:
eic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NT01EI_1182
Archaeal homologous recombinant proteins
NT01EI_1182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ACR68390
UniProt:
C5BHP6
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All DBs
Position
complement(1175993..1177225)
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AA seq
410 aa
AA seq
DB search
MRLIHTSDWHLGQHFYGKSRADEHRAFLDWLLLQAGQQQADAIIVAGDLFDTGTPPSYAR
ELYNRFVVALQGCGCQLIVLAGNHDSVATLNESRELLACLHTQVIAGAHADDVPRLLRRR
DGSPGAILCAVPFLRPRDLLQSRAGQSAAEKQLALQQAISDHYHTLYQRALTLQASLDQP
LPIVATGHLTTVGASGSESVRDIYIGTLDALPASAFPPADYIALGHIHRPQRVGHAEHIR
YSGSPIPLSFDELGSSKSVCLVTLEYDCTPQISLLPVPQSQPMRLIKGSLAEIGAAMEAL
RPLTTDKPVWLDIEIDSDGWLSESERALQKQAETLPVEILLLRRSREQRQRALTMQAGET
LSELTPDDVFSRRLALEPESDPQQQARAQQLFQQVLQEITLDPDTEETQA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgatccatacctccgactggcaccttggccagcatttctacggtaaaagccgc
gccgatgaacaccgtgcgtttctcgactggctgctgctgcaggccgggcagcagcaggcc
gacgccatcatcgtggccggcgatctgttcgataccggaacgccccccagctatgcccgc
gaactgtacaaccgctttgtggtggcgctgcaggggtgcggctgtcagctgatcgtcctg
gcgggtaaccacgactcggtggcgaccctcaacgagtcccgcgagctgctggcctgcctg
catacccaggtgatcgcgggcgcccacgccgacgatgtaccgcggctgctgcgacggcgc
gacggcagccccggcgccatcctgtgcgccgtcccctttctgcgcccgcgtgacctgctg
caaagccgcgccggccagtccgccgcggagaaacagctggcgctgcagcaggccatcagc
gatcactaccacaccctgtaccagcgggcgctgacgctgcaggcctcgctggatcagcca
ttgccgatcgtcgccactggccacctgaccaccgtcggcgccagcggctccgaatcggtg
cgcgatatctatatcggcacgctggatgccctgccggccagcgcctttcccccggcagac
tatatcgccctgggacacattcaccgcccacagcgggtcggtcacgcggagcatattcgc
tacagtggctccccgatacccctgagctttgacgagctgggcagcagcaaaagcgtctgt
ctggtgacgctggagtatgactgcacgccgcagatcagtctgctgcccgtcccacaaagc
cagccgatgcggctgattaaaggctcactggcagaaattggtgcggccatggaggccttg
cgcccactgacgacggataaaccggtctggctggacattgaaatcgacagcgacggctgg
ctcagcgaaagcgagcgcgcgctacagaagcaggcagagacgcttccggtagagatcctg
ctgctgcggcgcagtcgtgagcagcgccagcgcgccctgaccatgcaggccggcgagaca
ctgagcgagctgacccccgacgacgtatttagccgacgcctggcgctggagccggagagc
gacccccagcaacaggcgcgggcgcagcagctgttccagcaggtgctgcaggagataacg
ctggaccctgatacagaggagacgcaggcatga
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