Edwardsiella ictaluri: NT01EI_1290
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Entry
NT01EI_1290 CDS
T00912
Name
(GenBank) apurinic endonuclease (APN1)
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
eic
Edwardsiella ictaluri
Pathway
eic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NT01EI_1290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eic03400
]
NT01EI_1290
Enzymes [BR:
eic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
NT01EI_1290
DNA repair and recombination proteins [BR:
eic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NT01EI_1290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
ACR68487
UniProt:
C5BCN2
LinkDB
All DBs
Position
complement(1277302..1278150)
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AA seq
282 aa
AA seq
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MKYIGAHVSAAGGLDQAPARAHALEATAFALFTKNQRQWKAAPLTDDAIDAFRAACTRYG
YQSQQILPHDSYLINLGHPVTEALEKSRGAFIDEMQRCADLGLTLLNFHPGSHLLQIDER
DCLSRIAESINLALSQTQGVCAVIENTAGQGSNLGFRFEQLAAIIEQVEDKSRVGVCIDT
CHAFAAGYDLRDEAACGETFAQFSRTVGFSYLRGMHLNDAKSAFNSRVDRHQSLGEGNIG
DAAFRWIMRDPRFDGIPLILETTDPGRWQDEIAWLKAQQTAE
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatattggagctcacgtcagcgccgccggaggactggatcaggcccccgcccgc
gcccatgcgctggaggccaccgcatttgcgctgttcaccaagaatcagcgccagtggaaa
gcggccccgctgacagacgatgccattgacgccttcagggccgcctgcacgcgctacggt
tatcagtcgcagcagatcctgccgcacgatagctacctgattaatctgggccacccggtc
accgaggcgctggaaaaatcgcgcggcgcctttattgatgagatgcagcgctgcgccgat
ctgggactgaccctgctcaactttcaccccggcagtcacctgctgcagatcgacgagcgc
gactgcctgtcccgcatcgcggagtcgatcaatctcgcactctctcagacccagggggtg
tgcgcggtgatagagaacactgccggtcagggcagcaacctggggttccgcttcgagcag
ctggcggccattattgagcaggtcgaggacaaatcgcgcgttggggtctgtatcgatacc
tgtcatgccttcgccgcaggctatgatctgcgcgatgaggccgcctgcggggagaccttt
gcccaattttcccgcaccgtcggctttagttacctgcgcggcatgcacctcaacgatgcg
aaaagcgctttcaacagccgggttgatcggcaccagagcctcggggaaggcaatatcggc
gatgcggcgttccgctggatcatgcgcgatccacgctttgacggtatcccgctgatcctg
gaaaccaccgatcctgggcgctggcaggatgagatagcctggctcaaggcgcagcaaacg
gcagagtaa
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