Edwardsiella ictaluri: NT01EI_1821
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Entry
NT01EI_1821 CDS
T00912
Name
(GenBank) exoribonuclease II, putative
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
eic
Edwardsiella ictaluri
Brite
KEGG Orthology (KO) [BR:
eic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eic03016
]
NT01EI_1821
Enzymes [BR:
eic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NT01EI_1821
Transfer RNA biogenesis [BR:
eic03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NT01EI_1821
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ACR68998
UniProt:
C5BFN5
LinkDB
All DBs
Position
complement(1758102..1760045)
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AA seq
647 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRVEGVVKGTDKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
RAAVQVDKEREIAEPEELLEPFLTRFVGRIQKKENDERLSIIPDHPLLKDAIGCRPARGL
DRAFRQGDWVLAEMRRHPLKGDRSFFAEITAFITDGGDHFAPWWVTLARHDLACSAPQWQ
AGTLLEEGLDREDLCALPFVTIDSASTEDMDDALHVRENPDGSLRLTIAIADPTAYVSAD
SPLDAEACHRAFTTYLPGFNIPMLPRDLSDDLCSLREGQRRPVLACEVTLDADGGLRNDI
RFFSGWIESKAKLAYDRVSDWLEDCGDWQPPSDDIAAQIRLLHRVANARTQWRQQHALVF
RDRPDYRFVLDDHGNVTDIVAEPRRVANRIVEECMITANVCAALVLREGLGFGIYNVHTG
FDPALVEQAVSLLNANDVATNAEALLTLDGFCTLRRHLDSLPGTFLDSRIRRFQTFAEIS
TEPGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKALIAGKPTTRPVQAMTQQLAERRRQN
RMAERDVGDWLYARFLKERVNAPIPFNAEIIDISRGGMRVRLLENGAVAFIPASFIHAVR
DEMVCSQENGTLQVKGRVVYRQGDTVPVTLSEVRLDTRSLIARPFSA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgcttgcccagctaaaacagcaacttcactcgcagactccc
cgtgtggaaggcgtggtcaagggaaccgacaaaggctttggctttttagaggttgacgcg
cagaaaagctatttcattccaccgccgcaaatgaagaaagtgatgcacggtgaccgcatc
cgtgccgccgttcaggttgataaagagcgtgaaatcgccgagccggaagagctgttggag
ccattcctgacccgttttgtcggccgtattcagaaaaaagagaacgatgagcgcctgtcc
attatcccggaccatccgctgttgaaagacgccatcggctgtcgtccggcacgcggtctg
gatcgcgccttcaggcagggagactgggtgctggccgaaatgcgccgccacccactgaag
ggcgaccgcagcttctttgccgagatcaccgccttcatcaccgacggcggcgaccacttt
gccccttggtgggtcaccctggcccgtcacgatctggcgtgcagtgcaccgcagtggcag
gcgggaaccctgctggaggagggactggatcgcgaagatctgtgcgcgctgccgtttgtc
accatcgacagcgccagcaccgaagacatggatgatgcgctgcacgtgcgcgagaacccc
gacggcagcctgcgtctgaccattgccatcgccgatccgacggcctacgtcagcgccgac
agcccgctggacgccgaagcgtgtcatcgcgccttcaccacctatctcccgggctttaac
atcccgatgctgccgcgcgatctctccgacgacctgtgctcactgcgcgaagggcagcgc
cgtccggtgctggcctgcgaggtcaccctcgacgccgacggcggtctgcgcaacgacatc
cgcttcttcagcggctggatcgagtccaaagccaagctggcctacgatcgggtttccgac
tggctggaggactgcggcgactggcagccgccgagcgacgatatcgctgcccagatccgc
ctgctgcaccgcgtggccaacgcccgtacccagtggcgtcagcagcatgccctggtgttc
cgcgatcgcccggactaccgctttgtcctcgacgatcacggcaacgtcaccgatatcgtc
gcggagccgcgccgcgtggccaaccgcatcgtggaagagtgcatgatcactgccaacgtc
tgtgcggcgctggtgctgcgcgaaggcctcggattcgggatctacaacgtccataccggc
ttcgatccggcgctggtggaacaggccgtctcattactgaacgccaacgacgtcgccacc
aacgccgaagcgctgctgaccctggacggcttctgcaccctgcgccgccatctcgactcg
ctgccgggcaccttcctggatagccgtatccgccgcttccagacctttgccgaaatcagc
accgagccggggccgcactttggcctggggctggaggcctacgccacctggacttcaccg
atccgcaagtatggcgatatggtcaaccaccgtctgctgaaggcactgatcgccggtaag
ccgacgacgcggccggtccaggcaatgacgcagcagctggccgagcgccgccgccagaac
cggatggcggagcgcgacgtcggcgactggctgtacgcccgcttcctgaaggagagggtt
aacgccccgattccattcaacgccgagatcatcgatatctcacgcggtggcatgcgcgtc
cgcctgctggaaaatggcgcggtggcctttattccggcctcctttatccatgccgtgcgc
gacgagatggtatgcagtcaggagaacggcacccttcaggtgaaaggccgcgtcgtctac
cgccagggcgataccgttccggtgaccctgagcgaggttcgcctcgatacccgcagcctg
atcgcccgccccttcagcgcctga
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