Edwardsiella ictaluri: NT01EI_2606
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Entry
NT01EI_2606 CDS
T00912
Name
(GenBank) Type III restriction enzyme, res subunit
KO
K19789
DNA repair protein RadD
Organism
eic
Edwardsiella ictaluri
Brite
KEGG Orthology (KO) [BR:
eic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eic03400
]
NT01EI_2606
DNA repair and recombination proteins [BR:
eic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
NT01EI_2606
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
AAA_22
SLFN-g3_helicase
AAA_16
AAA
Motif
Other DBs
NCBI-ProteinID:
ACR69775
UniProt:
C5BG52
LinkDB
All DBs
Position
2496814..2498190
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AA seq
458 aa
AA seq
DB search
MAFTLRPYQREAVDATLAHFRRHREPALIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYLAWGLEADIYAAGLKQKGSQAKVVFGSVQSVARNLSDFDAAFSLLIVDECH
RIGDSEEGQYQQILQHLRGHNPQLRLLGLTATPYRLGKGWIYRYHYHGMIRGGDDCLFQD
CIYELPLRYMIRHGFLVPPERLDMPVVQYDFSRLQPSEAGLFSPEDLNRELRDQQRITPH
IVSQIEEYAATRRGVMIFAATVEHAREVLGLLPTGSAALISAQTPHDDRDAIIRDFKAQR
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLCDGKQDCLILDYAGNP
HDLYTPEVGSRKPHGDSQPVQVFCPACGFANTFWGKCDGQGRIVEHYGRRCQGYFEDDEG
RREQCDYRFRFKNCPQCNAEKRYRRPPLPSVRRAAGRR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcctttaccctgcggccataccagcgtgaggctgtcgatgccacgctggcccacttc
cggcgccaccgggaaccggcgctgatcgttctgccgaccggcgccgggaaaagtctggtg
atcgccgaactggccagactggcgcgcggacgggtcctggtgctggcccacgttaaagag
ctggtggcccaaaaccatgccaaatacctggcctggggacttgaggccgacatttatgcc
gccgggttaaagcaaaagggcagccaggccaaagtggtctttggcagcgtccagtcggtc
gcacgcaatctgtccgacttcgatgccgccttctccctgctgatcgtcgatgagtgtcac
cgcatcggcgacagcgaggagggacagtaccagcagatactgcagcacctgcgcggccat
aacccgcagctgcggctactcgggctcaccgcgaccccctaccgactcggcaagggctgg
atctaccgctaccactatcacggcatgatacgcggcggcgatgactgtctgtttcaggac
tgcatctatgagctgccgctgcgctatatgatccgccatggctttctggtgccaccggag
cggctggacatgccggtggtacagtacgacttcagccgtctgcagccgtcggaggccggg
ctcttcagccccgaggatctcaatcgagagctgcgcgatcagcagcgcattacgccgcac
atcgtcagccagatcgaggagtatgcggccacccggcgcggcgtgatgatcttcgccgcc
accgtcgaacacgcccgggaggtgctgggcctgctgccgacgggtagcgcggcgctgatc
agcgcgcagacgccccatgacgatcgggacgcgatcatccgcgatttcaaggcgcagcga
ctgcgctacctggtcaatgtggcggtgctcaccaccggctttgacgcgccgcacgtggat
ctgatcgctattctgcgaccgacggagtccgtcagcctgtaccagcagatcgtcgggcgc
ggcctacgcctgtgcgacggcaagcaggactgtctgatcctcgattacgccggtaaccca
cacgatctctatacgcccgaagtcggcagccgtaagccccacggcgacagtcagccggtg
caggtgttctgccccgcctgtggttttgccaataccttctggggcaagtgtgacgggcag
ggccgtatcgtcgagcactacgggcggcgctgccagggctattttgaggacgacgaaggg
cgacgcgagcagtgtgactatcgcttccgctttaaaaactgcccgcagtgcaatgcggaa
aaacgatatcgccgcccgccgctgccatcagtgcgccgcgctgctggtcgacgctga
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