Edwardsiella ictaluri: NT01EI_3042
Help
Entry
NT01EI_3042 CDS
T00912
Name
(GenBank) ATP-dependent RNA helicase SrmB, putative
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
eic
Edwardsiella ictaluri
Brite
KEGG Orthology (KO) [BR:
eic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eic03009
]
NT01EI_3042
Enzymes [BR:
eic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NT01EI_3042
Ribosome biogenesis [BR:
eic03009
]
Prokaryotic type
rRNA helicases
NT01EI_3042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ACR70194
UniProt:
C5BAI7
LinkDB
All DBs
Position
2930802..2932148
Genome browser
AA seq
448 aa
AA seq
DB search
MTATNFSELELDERLLDALRDKGYERPTAIQIAAIPPAMDGRDVLGSAPTGTGKTAAFLL
PALQHLLDFPRKKSGPPRVLILTPTRELAMQVADQARELARHTSLDITTITGGVSYINHA
EIFNTNQDLVVATPGRLLQYIKEENFDCRAVETLILDEADRMLDMGFASDIETVSAETRW
RRQTLLFSATLESDAVHDFAARLLNDPVDVSAEPPRRERKKIQQWYYRADSLKHKTALLC
NLLRQPDVTKSVIFVRKRERVHELVTWLHQAGIQACFLEGEMVQAKRNEAIKRMLDGRVN
VLVATDVAARGLDIPDISHVFNFDMPRSADVYLHRIGRTARAGRKGTAISLIEAHDQLLL
GKVSRYVQEPLKSRVVDNLRPETKAPSLKNKGKPSKKVQAKRAQKKLDEQKKKVKTKVRH
RDSKNIGKRRQPNAQSNPATAGAEDSGE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaaccaacttttccgaactcgaactcgacgagcgcctgctcgacgccctgcgc
gacaaaggctatgagcgcccgaccgccatccagatcgccgccatcccgcccgccatggac
ggacgggacgttttgggttccgcaccaacaggaaccggcaagaccgccgccttcctgctg
cccgcgctgcagcacctgctcgacttcccgcgtaagaagtccggcccgccgcgcgttctg
atcctgacgccgacccgcgaacttgccatgcaagtggccgatcaggcccgggagctggca
cgccacaccagcctggacatcaccaccatcaccggcggcgtttcctatattaaccacgcc
gagatctttaacaccaaccaggatctggtggtcgccacgccggggcgtctgttgcagtat
atcaaagaagagaactttgactgccgggcggtagagaccctgatcctcgatgaagctgac
cgcatgctggacatgggctttgccagcgacatcgaaaccgtctccgccgaaacccgctgg
cgtcggcagaccctgctgttctccgccaccctggagtccgacgcggttcacgactttgcc
gctcgcctgctcaacgatcccgttgacgtcagcgccgagccgccgcgccgtgagcgtaag
aagatccagcagtggtactatcgtgccgatagcctgaaacacaagaccgccctgctgtgt
aatctgctgcgccagccggacgtcaccaagtccgttatctttgtgcgcaagcgtgagcgc
gtgcatgagctggtcacctggctgcatcaggccggtatccaggcctgtttcctggagggc
gaaatggtgcaggccaagcgtaacgaggccattaagcgcatgctggacggccgggtcaac
gtgctggtcgccaccgacgtcgccgcccgcggtctggatattccggatatcagccacgtg
ttcaactttgacatgccacgcagcgccgatgtctacctgcaccgcatcgggcgtaccgca
cgcgccgggcgtaagggcaccgccatctccctgatcgaggcacacgaccagctgctgctc
ggcaaggtgagccgctatgtgcaggaaccgttgaagtcacgcgtcgtcgataatctgcgc
ccggaaaccaaagcgccgagcctgaagaacaagggtaaaccgtcgaagaaggtgcaggcc
aagcgggcgcagaaaaagctcgacgagcagaagaaaaaggtcaagaccaaagtgcgccac
cgcgacagtaaaaacatcggaaaacgccgccagcccaacgcccagagcaatcccgccacc
gcgggcgccgaggatagcggcgaataa
DBGET
integrated database retrieval system
