Edwardsiella ictaluri: NT01EI_3254
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Entry
NT01EI_3254 CDS
T00912
Name
(GenBank) tRNA pseudouridine synthase D, putative
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
eic
Edwardsiella ictaluri
Brite
KEGG Orthology (KO) [BR:
eic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eic03016
]
NT01EI_3254
Enzymes [BR:
eic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
NT01EI_3254
Transfer RNA biogenesis [BR:
eic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NT01EI_3254
Prokaryotic type
NT01EI_3254
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ACR70395
UniProt:
C5BGI9
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All DBs
Position
complement(3132100..3133146)
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AA seq
348 aa
AA seq
DB search
MEFSTLQYLHGRPVATGVVKAFAEDFFVAEDLGFTPDGEGEHVLVRLRKEGCNTQFVAEN
LARFARIAGRSVSYAGLKDRHAVTEQWFCLHLPGRDTPDFSQFVLEGCQVLAVARHRKKL
RIGTLRGNQFRLVLRHISDSAEVEERLRRVATQGVPNYFGEQRFGRGGNNLQQARRWATD
QIRVKERAKRGFYLSAARSALFNLLVSERLAAGCFSRVLAGDALQLTGRGSWFVAREAEL
SVLQQRLDVGELRITAALPGDGDGGVGGDAAEFERRVLSETADLQALLTRERVDPARRAV
LLQPQAMTWSWWDDATVELTFDLPAGSFATSVVRELFCQENSDADLAE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggagttttctacgctgcagtatctgcatgggcgcccggtggcgaccggggtggtcaaa
gcctttgccgaggatttttttgttgcagaggatctgggatttaccccggacggcgagggt
gagcatgtgctggttcgcctgcgtaaagaggggtgtaatacccagtttgtggcggagaat
ctggcccgctttgcccgtatcgccgggcgttcggtcagctacgccgggctgaaggatcgt
catgcggtgaccgagcagtggttctgcctgcatctaccggggcgtgatacgccagacttc
agccagtttgtgctggagggatgtcaggttctggccgtggcccgccatcgaaagaagctg
cgtatcggtacgctgcgtggcaaccagttccgcctggtgctgcgtcacatcagtgacagc
gccgaggtcgaagagcgcctgcgccgggtggcgacgcagggtgtgcccaactattttggc
gagcagcgctttggccgtggcggtaataatctgcagcaggcgcgtcgctgggccaccgat
cagattcgggtgaaagagcgcgccaagcgcggtttctatctctccgcggcgcgcagcgcg
ctgtttaatttgttggtaagtgagcggctggctgcgggttgtttttctcgggttctggcg
ggcgacgcgctgcagctgaccggtcgcggcagctggtttgtcgcccgggaggcggagctg
tcggtgctgcagcagcggctggacgtcggcgagctgcgcattacggcggcgctgccgggc
gacggtgacgggggcgtcggcggcgatgcggcagagtttgaacgtcgggtgctatctgag
acggctgatctgcaggccctgctgacgcgtgagcgggtagatccagcacgccgtgcggtg
ttgctgcagccgcaggcgatgacctggagctggtgggatgacgccaccgtcgagctgacc
ttcgatctgcccgccggtagtttcgccaccagcgtagtgcgtgaactgttctgtcaggaa
aactccgatgcggatcttgctgagtaa
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