Edwardsiella ictaluri: NT01EI_3570
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Entry
NT01EI_3570 CDS
T00912
Name
(GenBank) DNA-directed RNA polymerase subunit alpha, putative
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
eic
Edwardsiella ictaluri
Pathway
eic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NT01EI_3570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eic03021
]
NT01EI_3570
03400 DNA repair and recombination proteins [BR:
eic03400
]
NT01EI_3570
Enzymes [BR:
eic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NT01EI_3570
Transcription machinery [BR:
eic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NT01EI_3570
DNA repair and recombination proteins [BR:
eic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NT01EI_3570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ACR70699
UniProt:
C5BF27
LinkDB
All DBs
Position
complement(3469836..3470825)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQLSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVKVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPHHVICHLTDENASINMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEESIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaactgagt
tcgacgcacgccaaggtgacccttgagccgttagagcgtggctttggccatactcttggt
aacgcactgcgccgtattctgctttcatctatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactgcacgagtacagcaccaaagaaggcgtacaggaagatatcctggaa
atcctgctcaacctgaaagggctggcggtgaaagttcaaggcaaagatgaagtaattctt
accctgaataaatctggcattggccctgtgactgcagccgacattacccatgatggtgat
gtcgaaatcgtcaagccgcaccatgtaatctgtcatctgactgatgaaaacgcatctatt
aatatgcgtatcaaagttcagcgtggtcgtggttatgtgccggcatctgcccgaattcat
tcggaagaagatgagcgcccgatcggccgtctgttggtcgacgcctgctacagccctgta
gagcgtattgcctacaatgttgaagcagcgcgcgttgaacagcgtaccgacttggacaag
ctggtcatcgagatggaaaccaacggtaccattgacccggaagagtcaattcgccgtgcg
gcaactatcctggctgaacaacttgaagctttcgttgacctgcgtgatgtacgtcagccg
gaagtgaaagaagagaagccagagttcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgcgaactgcctgaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagttgctgaaaacgccgaacctgggtaaaaaatctctt
actgagattaaagacgtgctggcctctcgcggcctctctctgggcatgcgcctggaaaat
tggccgccggcaagtatcgctgacgagtaa
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