KEGG   Edwardsiella ictaluri: NT01EI_3702
Entry
NT01EI_3702       CDS       T00912                                 
Name
(GenBank) alternative sigma factor RpoH, putative
  KO
K03089  RNA polymerase sigma-32 factor
Organism
eic  Edwardsiella ictaluri
Brite
KEGG Orthology (KO) [BR:eic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eic03021]
    NT01EI_3702
Transcription machinery [BR:eic03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NT01EI_3702
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 KORA HTH_10 HTH_AsnC-type UCR_14kD HTH_3 CRLF2-like_D2
Other DBs
NCBI-ProteinID: ACR70830
UniProt: C5B990
LinkDB
Position
complement(3589272..3590126)
AA seq 284 aa
MTKEMQTLTLVPQGSLEAYVRAANAYPMLTAEEERALGERLHYKGDLDAAKQLILSHLRF
VVHVARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEMGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVELVARELGVSEKDVLEMESRMAAQDM
AFDLPGDDEQEGAPAAPVLFLQDKSSDFANEIEDDNWESHAADKLSVALEGLDERSQHII
RARWLDSDNKATLQELADRYGVSAERVRQLEKNAMKKLRMAIEA
NT seq 855 nt   +upstreamnt  +downstreamnt
atgaccaaagaaatgcaaactttaaccttggttccccagggcagtctggaggcctacgtg
cgggctgccaacgcctatccgatgctgacggcagaggaagagcgggcgctgggggaacgg
ctgcattacaagggagacctggatgcagccaaacagctgatcctgtcgcacctgcgcttt
gtggttcatgtcgcccgtaactacgctggctacggactgccgcaggcagatctgatccag
gagggcaatatcggcctgatgaaggccgtgcgtcgctttaaccccgagatgggggtgcgc
ctggtatcatttgccgtgcactggatcaaggccgagatccatgaatatgtgctgcgcaac
tggcgtatcgttaaagtcgcgactacaaaggctcagcgtaagctgttctttaacctgcgt
aaaaccaagcagcgcctgggatggtttaatcaggacgaggtcgagctggtggcccgggaa
ctgggcgtgagcgagaaggacgtgctggaaatggagtcgcgcatggccgctcaggacatg
gcgttcgacctgcccggtgatgacgagcaggagggtgcaccggcagcgccggtgctgttc
ctgcaggataagtcctctgactttgccaatgagatcgaggatgacaactgggaaagccac
gccgcagataagctgagcgtcgccctggaggggctggacgagcgtagtcagcacatcatt
cgcgcccgttggctggacagtgacaataaggccactctgcaagagttggccgatcgctat
ggcgtttccgcagagcgcgtgcgtcagctggaaaaaaatgccatgaagaagctgcgtatg
gcgatagaagcctga

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