Edwardsiella ictaluri: NT01EI_3873
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Entry
NT01EI_3873 CDS
T00912
Name
(GenBank) DNA polymerase I, putative
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
eic
Edwardsiella ictaluri
Pathway
eic03030
DNA replication
eic03410
Base excision repair
eic03420
Nucleotide excision repair
eic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NT01EI_3873
03410 Base excision repair
NT01EI_3873
03420 Nucleotide excision repair
NT01EI_3873
03440 Homologous recombination
NT01EI_3873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eic03032
]
NT01EI_3873
03400 DNA repair and recombination proteins [BR:
eic03400
]
NT01EI_3873
Enzymes [BR:
eic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NT01EI_3873
DNA replication proteins [BR:
eic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NT01EI_3873
DNA repair and recombination proteins [BR:
eic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NT01EI_3873
NER (nucleotide excision repair)
GGR (global genome repair) factors
NT01EI_3873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH
Prok-E2_E
DUF2529
Motif
Other DBs
NCBI-ProteinID:
ACR70991
UniProt:
C5BC85
LinkDB
All DBs
Position
complement(3751880..3754672)
Genome browser
AA seq
930 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIIQYQPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLREQIAPLHQMVEAMGLPLLVVPGVEADDVIGT
LARRAELAGRHVLISTGDKDMAQLVTPNITLINTMTNTVLGPQEVCDKYGVPPSLIIDFL
ALMGDASDNIPGVPGVGEKTAQALLQGIGSLKTIYDDLDRVATLSFRGAKTMGAKLLLNK
EKADLSYLLATIKTDVDLAQGGDDLAIKVLDSETLHQLFSRYEFKRWLSDVQEGSWLTGA
TGGRKTRGNKIADTPAALAPEVFVTLTREGYQTILDEAALEALITRLRQAGSFAFDTETD
SLDVLSANLVGISCADKPGQACYIPLAHDYLDAPHQLDRQYVLARLQPLLEDEGIAKIGQ
NLKYDIGVMARYGITLRGVAFDTMLESYVLNSVAGRHDMDSLSARHLDHKTITFEEIAGK
GKGQLTFNQIPLEQASEYAAEDADVTLQLHQHLWPMLEGESGPSHIFRDIDMPLVPVLSR
MERTGVLIDSAILGQHSQELAVRLEALEQQAHSEAGEPFNLSSTKQLQSILFEKQQLPVL
KKTPGGAPSTNEEVLVELAEQGYALPQVILEYRTLAKLKSTYTDKLPLMVNPLTGRVHTS
YHQAVTATGRLSSSDPNLQNIPVRSDEGRRIRQAFIAPVGSRIVAADYSQIELRIMAHLS
GDKGLLQAFAAGKDIHRATAAEVFGLPLEAVSADQRRSAKAINFGLIYGMSAFGLARQLN
IGRGEAQRYMDLYFERYPGVLAYMERTRQLASDQGYVETLDGRRLYLPEINARNGMRRKA
AERAAINAPMQGTAADIIKRAMIAVDGWLQETQLEVRMIMQVHDELVFEVPESQVEAVVC
QVRVLMENSLSLAVPLKVDIGCGENWDQAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatagctgaaaatcccctgatcctggttgatggatcctcatacctttaccgt
gcctatcatgcgtttccaccgctgaccaatagcgccggggagcctaccggggctatgtat
ggtgtgctgaatatgctgcgaagcctgatcatacaatatcagccgagccatgttgccgtg
gtgtttgatgccaagggcaaaacgtttcgcgatgagctgtttgccgaatataagtcacat
cgtcctccgatgccggacgatctgcgtgagcagatagcgccgttgcaccagatggttgag
gcgatggggctaccgctgctggtcgtaccgggggtggaggcggacgatgtgatcggcacg
ctggcgcgccgcgctgagctggcggggcggcatgttctgatcagcaccggcgacaaggat
atggcgcagctggtaacaccgaatatcacgcttatcaatacgatgaccaacactgttctg
ggacctcaggaggtgtgtgacaaatatggggtgccgccgtcgctgatcatcgacttttta
gcgctgatgggcgatgcctctgacaatattcccggcgtccccggcgtaggtgagaagacg
gcgcaggcgctgttgcagggcattggcagcctgaagacgatttatgatgatctcgatcgg
gtggctaccctgagctttcgtggcgcgaagactatgggagccaagctgctgttgaataaa
gaaaaggccgatctttcctacctgttggcgaccattaagaccgacgttgatctggcgcag
gggggcgacgatttggccattaaagtgctggatagtgagacgctgcaccagttgttcagc
cgctatgagtttaagcgatggctgagcgatgtgcaggagggctcttggctaacaggggcg
acaggcggtcgtaaaacgcgggggaataaaatcgctgacacacctgcggcgcttgcgccg
gaggttttcgtgacgctgacgcgcgagggctaccaaacgatcctcgatgaggccgcgctg
gaggcattgattacgcgcctgcgccaggccgggagctttgcctttgatactgagaccgat
tcgctggatgtactgtcggccaatctggtggggatctcctgcgccgataagccggggcag
gcatgttacatcccgctggcccatgactacctggatgcgccgcatcagctcgatcgtcag
tatgttctggcgcgcctacagccgctgctggaggatgaagggatagccaagattggtcag
aacctgaagtatgatattggcgttatggcgcgctatggtatcacgctgcgcggcgtggca
tttgataccatgttggagtcctatgtgctcaatagcgttgctgggcgccatgatatggat
agcctatctgctcgccatctcgaccataaaacgattacgtttgaagagattgccggtaaa
ggaaaaggtcagctgacgttcaatcaaatcccgctggagcaggcgtcggagtatgccgca
gaggatgccgatgttaccctgcagctgcatcagcatttgtggccgatgctggagggagag
tctggtccgagccatattttccgcgatattgatatgccgttggttccggtgctgtcgcgg
atggagcgtaccggggtgttgatcgacagcgcgattctgggtcaacattcacaggagctg
gcggtacggctggaggcgctggagcagcaggcgcatagcgaggctggagagccatttaat
ctgtcatcgaccaaacagctgcagagtattctgtttgagaagcagcagctgccggtattg
aagaaaacgccgggcggagcgccatcaaccaatgaagaggtgctggttgagctggccgag
caggggtatgcgttgccacaggtaatcctggagtaccgcacgctggccaagctgaagagt
acctacaccgataagttaccgctgatggttaatccgctgacgggccgggtacatacctcc
tatcatcaggccgtcaccgcgacaggccgtctgtcatccagcgatcctaacctgcagaat
atccccgtgcgcagcgacgaagggcggcgcatccgtcaggctttcatcgcgccggtcggc
agccggattgtggcggcggattactcacagattgagctgcgcataatggcacacttatcg
ggagacaaagggctgctgcaggcatttgcggcagggaaagatatccatcgcgccacggcg
gcagaggtctttggcttgccgttagaggcggtgagcgccgatcagcgccgcagcgctaag
gcgattaactttggcctgatttatggtatgagcgcttttggtctggctcgtcagctgaac
attggccgcggcgaagcccaacgctatatggatctctactttgagcgctatccgggcgtg
ctggcctatatggagcgcacccgccagctggcatcggatcagggctatgttgaaacgctg
gatggccgtcggctctatctgcccgagatcaacgcgcgcaacggtatgcgccgtaaagcg
gcggagcgtgccgcgattaacgcgccgatgcagggaacggcggccgatatcattaaacgg
gccatgattgccgttgatggctggctacaggagacccagctggaggttcgtatgattatg
caggtacacgatgaactggtatttgaagtgccagagtctcaggttgaggcggtggtctgt
caggttcgtgtactaatggaaaatagcctgtcgctggcggttccattaaaagttgatatt
ggttgtggtgaaaattgggatcaagctcactaa
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