Edwardsiella ictaluri: NT01EI_3903
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Entry
NT01EI_3903 CDS
T00912
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA, putative
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
eic
Edwardsiella ictaluri
Brite
KEGG Orthology (KO) [BR:
eic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eic03016
]
NT01EI_3903
03036 Chromosome and associated proteins [BR:
eic03036
]
NT01EI_3903
Transfer RNA biogenesis [BR:
eic03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
NT01EI_3903
Prokaryotic type
NT01EI_3903
Chromosome and associated proteins [BR:
eic03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
NT01EI_3903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
SAM_GIDA_C
FAD_oxidored
FAD_binding_2
HI0933_like
Pyr_redox_2
AlaDh_PNT_C
Thi4
Pyr_redox
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
ACR71014
UniProt:
C5BF31
LinkDB
All DBs
Position
3781106..3782995
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AA seq
629 aa
AA seq
DB search
MFYPDPFDVIIIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGHMSCNPAIGGIGKGHLV
KEVDALGGLMAQAIDKGGIQFRILNGSKGPAVRATRAQADRILYRQAVRMALENQPNLMI
FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLNGKIHIGLENYSGGRAGDPPS
IGLARRLRELPLRVNRLKTGTPPRLDARTIDFSVLAQQHGDNPAPVFSFLGEASQHPRQV
PCYITHTNEHTHEVIRGNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPE
GLSSNEIYPNGISTSLPFDVQMAIVRSMAGMQNTRIVRPGYAIEYDFFDPRDLKPTLESK
YIQGLFFAGQINGTTGYEEAAAQGLLAGLNAGRCAADLEGWMPRRDEAYLGVLVDDLCTL
GTKEPYRMFTSRAEYRLMLREDNADLRLTPIGRELGLVDDVRWAQFNQKLENMERERQRL
RETWVHPQSERAAEVNVLLKTPLSREASGEDLLRRPEMDYATLTSLSPFYPPLADRQAAE
QVEIQVKYQGYIARQQDEIEKQLRNENTLLPADLDYRQVNGLSNEVIAKLNDHKPSSIGQ
ASRISGITPAAISILLVWLKKQGMLRRSL
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgttttaccccgatccctttgacgtcatcattatcggtggcggccatgccggtaccgaa
gcggccatggcttctgcccgaatgggccgccagaccctgttattaacacataatatcgat
acgctaggacatatgtcctgcaatccagccatcggtggtatcggtaaggggcacttagta
aaagaggtcgatgccctggggggactgatggctcaggcgatcgacaaaggtgggatccag
tttaggatcctcaacggcagcaaaggacccgcggtacgtgcaacccgggcacaggccgat
cgcatactgtatcgtcaggcggtacgtatggcgctagagaaccagcccaacctgatgatc
tttcaacaggctgtagaggatctgatcgttgaaaacgatcgcgtcgtcggtgcggttacc
caaatggggctaaagttccgcgccaaagctgtggttctcaccgtaggcacgttcctgaac
ggtaaaattcatatcggtctggagaactacagcggtggtcgcgcaggcgatccgccttcc
atcggactggcccgccgcctgcgcgagttaccgctacgggtaaaccgactgaaaaccggc
acacctccgcgccttgacgctcgaaccatcgacttcagcgtgctggcgcagcagcacggt
gacaacccagcgccggttttttctttcctcggtgaggccagtcagcatccgcgtcaggta
ccgtgctatataacgcataccaacgaacatacccatgaggtgatccgcggcaatctggat
cgcagcccgatgtatgccgggatcatcgaggggatcggcccacgctattgcccgtcgatc
gaagataaggtgatgcgctttgccgatcgtaatgcgcaccagatctttttggagccagag
ggactgagcagcaatgagatctatccaaacgggatctcaaccagcttgccgtttgacgtt
cagatggccatcgtacggtcgatggcggggatgcaaaacacccgcatcgtgcgtccgggg
tatgcgattgagtatgatttcttcgatccgcgggacttgaagcccaccctggagagtaaa
tacattcaggggctgttcttcgccggtcagatcaacggcacaaccggctatgaggaagcg
gcggcacaggggttactggcaggcctgaacgctggacgctgtgctgccgatttagaaggt
tggatgccccgtcgcgacgaggcataccttggcgtgctggtggatgacctgtgtaccctg
ggtaccaaagagccctaccgcatgtttacctcacgtgcggagtatcgtctgatgttgcgt
gaagataacgccgacttgcgtttgaccccgatagggcgtgaactgggtctggtcgacgat
gtgcgttgggcccagtttaaccagaagctggaaaacatggagcgtgaacgtcagcgcctg
cgtgaaacctgggtacacccgcagtctgaacgggcggctgaggtgaatgtgttgttaaaa
accccgctgtctcgcgaggccagcggtgaggatctattgcgtaggcctgagatggattat
gccacgctgacctcgctgtctccgttttatccaccgctggcggatcgtcaggcggctgag
caggttgagatccaagttaaataccaagggtatattgcccgtcagcaggacgaaattgaa
aagcagctgcgtaacgaaaatacgttgctgccagccgatttggactatcgtcaggtcaat
ggcttgtccaatgaggtgatcgcgaaacttaacgatcataaacccagctctatcggtcag
gcatcgcgtatttccggtattacgcctgcagcgatctctattctgctggtgtggctgaaa
aagcagggaatgctgcgtcgcagcctgtag
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