Enterococcus innesii: ENLAB_00960
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Entry
ENLAB_00960 CDS
T08116
Symbol
deaD_1
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
eie
Enterococcus innesii
Brite
KEGG Orthology (KO) [BR:
eie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eie03019
]
ENLAB_00960 (deaD_1)
03009 Ribosome biogenesis [BR:
eie03009
]
ENLAB_00960 (deaD_1)
Enzymes [BR:
eie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ENLAB_00960 (deaD_1)
Messenger RNA biogenesis [BR:
eie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ENLAB_00960 (deaD_1)
Ribosome biogenesis [BR:
eie03009
]
Prokaryotic type
rRNA helicases
ENLAB_00960 (deaD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Helicase_RecD
AAA_22
CMS1
PRAI
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BDG66532
LinkDB
All DBs
Position
100681..102027
Genome browser
AA seq
448 aa
AA seq
DB search
MSFESFKFQPFIYEALADKKFSKPTEVQEKLIPVIQKGRSVVGQSQTGSGKTHTFLLPLM
DKIDAEKDEVQVVITAPSRELATQIYHAAKQIGGFHDPEIRVSNFVGGTDKQRQLSRLQN
QQPHVVIGTPGRILDMINEQALGVHTANVFVVDEADMTLDMGFLEEVDQIAGRLPEKLQM
LVFSATIPEKLRPFLKKYMANPLIEEIKSKAVISDTIENWLISTKGKNTNKLIYQLLTTG
HPYLAIVFANTKSRVDEITDYLKEQGLKVAKIHGDISPRERKRIMRQVQNLDYQYVVATD
LAARGIDIEGVSHVINAEIPADLDFFIHRVGRTGRNQMDGTAITLYDPSDEGAIQAIEDL
GVVFQPKEIKNGEIVATYDRNRRQKREKSRDELDPTLIGLVKKKKKKIKPGYKKKIQWAV
DKKNKEKRKIERRQTTRTARKNKKNSNS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgagtcatttaaatttcaaccatttatttatgaagcacttgctgataaaaag
ttctctaaaccaacagaagtgcaagaaaaactgatacctgttatccaaaaaggccgtagt
gttgtagggcaatcacagaccggaagtggtaagacccacacatttttactgccattgatg
gataaaatcgatgccgaaaaagatgaagtgcaagtagtgatcactgcaccgagtcgtgaa
ttagccacgcaaatctatcacgccgcaaaacaaatcggcggatttcatgatcctgaaatt
cgagtgtcaaatttcgttggaggaacggataagcaacgtcaattgagccgtctgcaaaac
caacagccccatgtcgtgattgggacacctggtcgtatcttggatatgatcaacgaacaa
gcgttaggggttcacactgccaatgtatttgtcgtggatgaagcagacatgaccttggat
atgggctttttagaagaagtcgatcaaattgcggggcgtttgcctgagaaactgcaaatg
ctggttttctccgcaacgattccagagaaattgcgacctttcttgaaaaaatacatggcc
aatccattgatcgaagaaatcaaatcgaaagcagtcatctctgatacgatcgagaattgg
ttgatttctaccaaagggaaaaataccaataaattgatctaccaattattgactacaggc
catccctatcttgccatcgtttttgccaacacgaagagccgtgtggatgaaattacggat
tacttaaaggagcaaggtttaaaagtggcgaagatccacggcgacatcagccctcgtgaa
agaaaacggatcatgcgccaagtgcaaaatttggactaccaatatgtggtcgcaacagat
ttagcggcgcgagggattgatattgaaggggtgtctcatgtcatcaatgctgagattcca
gctgatttggatttctttatccatcgtgttggtcggacaggtcgaaaccaaatggatggg
accgcgattacgttatatgatccaagtgatgaaggggcaatccaagccatcgaagatcta
ggggttgttttccaaccgaaggaaatcaaaaatggcgagatcgttgcgacttacgatcgg
aatcgtcgacaaaagcgggaaaaatctcgtgatgaattagacccaaccttgattggccta
gtcaagaagaagaagaaaaaaatcaagcctggctacaagaaaaaaattcaatgggctgtt
gataagaagaacaaagaaaaacggaagatcgaacgccgtcaaacgactcgaactgcccgc
aaaaacaagaaaaattcgaatagttaa
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