Enterococcus innesii: ENLAB_17460
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Entry
ENLAB_17460 CDS
T08116
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
eie
Enterococcus innesii
Pathway
eie03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eie00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ENLAB_17460 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eie03021
]
ENLAB_17460 (rpoC)
03400 DNA repair and recombination proteins [BR:
eie03400
]
ENLAB_17460 (rpoC)
Enzymes [BR:
eie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ENLAB_17460 (rpoC)
Transcription machinery [BR:
eie03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ENLAB_17460 (rpoC)
DNA repair and recombination proteins [BR:
eie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ENLAB_17460 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
BDG68182
UniProt:
A0ABM7XSU7
LinkDB
All DBs
Position
complement(1870523..1874173)
Genome browser
AA seq
1216 aa
AA seq
DB search
MIDVNKFESMQIGLASPEKIRSWSYGEVKKPETINYRTLKPEREGLFDERIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVIEPGNTSLEKKQLLTEREYREKRDQYGQEFSAAMGAEAIKQLLD
GVDLEGEVAELKEELKNATGQKRTRAIRRLDILEAFRASGNKPSWMVMDVIPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVAGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPFLKMYQCGLPKE
MAIELFKPFVMRELVSREIASNIKNAKRKIERQEDEVWDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPVLVEGRAIRLHPLVCEAYNADFDGDQMAVHVPLNEEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTMEEEGREGEGMIFRDMDEAVTAWRNGYVHLHTRIAIN
PNTLGDKPFTSEQKQRLMVTTVGKVIFNSIMPPEFPFLNEPTDYNLTVQTPDKYFIEAGT
DVPAFIKEQELVGPFKKKNLGNIISEVFKRFRITETSRMLDRMKDLGYSHSTMAGITVGI
ADIMNLHEKHEIIDNAHKQVETITKQFRRGLITDDERYERVIGVWNAAKDEIQLKLMESL
EAKNPIFMMSDSGARGNISNFTQLAGMRGLMAAPNGRIMELPIISNFREGLSVLEMFIST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLDIQAIREGNEIIESLE
ERLVGRYTRKSIIHPETGEVILGVNQLITEDLAKATVDAGIETVSIRSVFTCNTKHGVCK
HCYGRNLATGSEVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVQEIF
EARNPKGQAVITEVTGEVIDISEDPSTRTKEVTIKGETDTRTYTVPYTARMKVAEGDFIH
RGAPLTEGSIDPKQLLQVRDVLSVENYLLREVQRVYRMQGVEIGDKHIEVMVRQMLRKVR
VMDPGDSGILPGTLLDIADFKDRNYDTLVAGGVPATSRPVLLGITKASLETNSFLSAASF
QETTRVLTDAAIRGKKDPLLGLKENVIIGKIIPAGTGMPRYREMEPKEVTVASENVYSIS
DIEAQMAAEDALNSQN
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgatgtaaataaattcgaaagtatgcaaatcggtttggcttctcctgaaaaaatc
agaagctggtcttatggtgaagtaaaaaaaccagaaaccattaactaccgtacgttaaaa
cctgaacgcgaagggttgtttgacgagcgtattttcggtccaaccaaagactgggaatgt
gcttgcggcaaatataaacggatccgctataaaggcatcgtttgtgaccgttgcggcgtg
gaagtaacacgttcaaaagtgcgtcgtgaacgcatgggacacattgaattagcagcacca
gtatcacacatttggtatttcaaaggcattccttcacggatgggtcttgtcttagacatg
agcccacgtgcattggaagaaatcatctactttgcttcatacgtagtgattgaaccagga
aacaccagtcttgagaaaaaacaactattgactgaacgggaataccgtgaaaaacgtgac
caatacggtcaagaattttcagcagcgatgggtgccgaagccatcaaacaattattagat
ggcgttgatcttgaaggcgaagttgctgaattaaaagaagaattgaaaaacgcaactggt
caaaaacggacccgtgcgatccgccgtttggatatcttagaagcattccgtgcttcagga
aacaaaccaagctggatggtcatggacgttatcccagttatcccgcctgatttgcgtcca
atggtgcaattagaaggtggacgttttgccacaagtgacttgaacgacttgtatcgtcgt
gtaatcaaccgtaacaaccgtttgaaacgcttgttagacttgaatgcaccaaacatcatc
gttcaaaatgaaaaacggatgctgcaagaagcagttgatgccttaatcgataacggtcgt
cgcggccgtccagttgcagggccagggaaccgcccattgaaatctctttctcacatgttg
aaagggaaacaaggtcgtttccgtcaaaacttgctaggaaaacgggtcgactactcaggt
cgttcagttatcgtcgttggtccattcctgaaaatgtaccaatgtggtctgccaaaagaa
atggcgatcgaattattcaaaccattcgtgatgcgggaacttgtttctcgtgaaatcgcg
tcaaacatcaaaaatgccaaacgcaaaatcgaacgtcaagaagacgaagtttgggatgtt
ttagaagatgtcatcaaagaacatccagtgctattgaaccgggcacctacgcttcacaga
ttaggtatccaagcatttgaaccagtcttagttgaaggccgtgccattcgtttgcaccca
cttgtttgtgaagcctacaatgccgatttcgatggagaccaaatggccgttcacgtacca
ttgaacgaagaagcgcaagcagaagcacgtatgctgatgttagcagcccaaaacattttg
aatccaaaagacggaaaaccagttgtaacaccatctcaggatatggtcctagggaactac
tacttgacgatggaagaagaaggccgtgaaggggaaggcatgatcttccgtgacatggac
gaagcagttacggcatggcgcaatggctacgtgcatttacacacacggatcgctatcaat
ccaaacactttaggggacaaaccattcacgtctgaacaaaaacaacgtttgatggtaaca
acagtgggtaaagtgatcttcaactcgatcatgcccccagaattcccattcttgaacgaa
ccgacagactacaacttgacggttcaaacaccagacaagtactttattgaagctggtaca
gatgtgcctgccttcatcaaagaacaagagcttgttggcccattcaagaagaaaaactta
ggaaacatcatttcagaagtcttcaaacgtttccgcatcactgaaacgtcacgcatgctt
gaccgcatgaaagacttaggatacagccactcaacaatggcgggtatcaccgttggtatc
gctgatatcatgaacttgcacgaaaaacatgaaatcatcgacaatgcccacaaacaagta
gaaacgatcacgaaacaattccgtcgtggattgattaccgatgacgagcgttatgaacga
gttattggtgtttggaatgcagccaaagatgaaattcagttaaaactgatggaatcattg
gaagcgaaaaacccaatcttcatgatgtctgattccggtgcccgtggtaacatctccaac
tttactcagcttgctgggatgcgtggattgatggccgcgcctaacggacgtatcatggaa
ttgccgatcatctcaaacttccgtgaaggtctatctgtcttggaaatgtttatctcgacc
catggtgcccgtaaagggatgaccgataccgccttgaaaacagccgattccggttacttg
acacgtcgtctcgttgacgttgcccaagatgtcatcatccgtgaagacgattgtggcact
gaccgtggtttagatattcaagcaattcgcgaaggaaacgaaatcatcgaatccttagaa
gaacgtttagttggtcgttacactcgtaaatcaatcatccatccggaaactggcgaagtg
attcttggggtcaaccaattgatcaccgaagacctagccaaagcaacggtggatgctggc
atcgaaacagtatcgattcgctctgtctttacatgtaacaccaaacatggtgtatgtaaa
cattgttatggccgcaacttagccactggttctgaagttgaagttggggaagcagtcggt
accatcgctgcccaatcaatcggtgaacctggtactcagttgaccatgcgtaccttccat
accggcggggttgccggagacgatatcacgcaaggtctccctcgtgtccaagaaatcttt
gaagcccgtaatccgaaaggacaagcggtcattaccgaagttaccggagaagtcatcgat
atctcagaagacccttcaactcggaccaaagaagtgaccatcaaaggggaaaccgatacg
cgtacgtataccgttccttatactgcccggatgaaagtagcagaaggcgactttatccat
cgtggtgcaccattgacagaaggatcgatcgatccaaaacaactgttacaagttcgcgat
gtcttgtctgttgaaaactacctattacgggaagttcaacgcgtttaccgtatgcaaggg
gtagaaatcggcgacaaacatatcgaagtaatggttcgtcaaatgctgcgtaaagtccgc
gtcatggatccaggtgattcaggcatcttgccaggaacattgttggatatcgccgacttt
aaagaccgcaactacgacaccttggtagccggcggcgttcctgcaactagccgtccagtc
ctactagggatcacgaaagcatccttggaaaccaacagcttcttgtctgctgcgtccttc
caagaaaccactcgtgtgttgaccgatgcagcgatccgcggcaagaaagatccacttctt
ggattgaaagaaaatgttatcatcggtaagatcatcccagctggtactggtatgcctcgt
taccgtgaaatggaaccaaaagaagtaacagttgccagcgaaaatgtctacagcatctca
gacatcgaagcacaaatggctgctgaagacgcattgaacagccaaaactaa
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