Escherichia coli O18 K1 H7 IHE3034 (ExPEC): ECOK1_0145
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Entry
ECOK1_0145 CDS
T01997
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
eih
Escherichia coli O18:K1:H7 IHE3034 (ExPEC)
Pathway
eih03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECOK1_0145 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eih03019
]
ECOK1_0145 (pcnB)
Enzymes [BR:
eih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ECOK1_0145 (pcnB)
Messenger RNA biogenesis [BR:
eih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ECOK1_0145 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ADE89413
LinkDB
All DBs
Position
complement(163691..165055)
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AA seq
454 aa
AA seq
DB search
MLSREESEAEQAVARPQVTVIPREQHAISRKDISENALKVMYRLNKAGYEAWLVGGGVRD
LLLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNV
SDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGV
IRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESL
KLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMR
VNPAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTR
DIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAP
PDQKGMLNELDEEPSPRRRTRRPRKRAPRREGTA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgctaagccgcgaggaaagcgaggctgaacaggcagtcgcccgtccacaggtgacggtg
atcccgcgtgagcagcatgctatttcccgcaaagatatcagtgaaaatgccctgaaggta
atgtacaggctcaataaagcgggatacgaagcctggctggttggcggcggcgtgcgcgac
ctgttacttggcaaaaagccgaaagattttgacgtgaccaccaacgccacgccagagcag
gtgcgcaaactgttccgtaattgccgcctggtgggtcgccgtttccgtctggctcatgtg
atgtttggcccggagattatcgaagttgcgaccttccgtggacatcacgaaggtaacgtc
agcgaccgcacgacctcccaacgcgggcaaaacggtatgttgctgcgcgacaacattttc
ggctccatcgaagaagacgcccagcgccgcgatttcactatcaacagcctgtattacagc
gtggcagattttaccgtccgtgattacgttggcggcatgaaggatctgaaagacggcgtt
atccgtctgattggtaacccggaaacgcgctaccgtgaagatccggtacggatgctccgc
gcggttcgttttgccgccaaattgggcatgcgcatcagcccggaaaccgcagaaccgatc
cctcgcctcgctaccctgctgaacgatatcccaccggcacgcctgtttgaagaatcgctt
aaactgctacaagcgggctacggttacgaaacctataagctgctgtgtgaatatcatctg
ttccagccgctgttcccgaccattacccgctacttcacggaaaatggcgacagcccgatg
gaacgcattattgagcaggtactgaagaataccgatacgcgtatccataacgatatgcgc
gtgaacccggcgttcctgtttgccgccatgttctggtacccattgctggagacggcacag
aagatcgcccaggaaagcggcctgacctatcacgacgctttcgcactggcgatgaacgac
gtgctggacgaagcctgccgttcactggcgatcccgaaacggctgaccacgctaacccgc
gatatctggcagttgcagttgcgtatgtcccgtcgtcagggtaaacgcgcatggaaactg
ctggagcatcctaagttccgtgcggcatacgacctgttggccttacgagccgaagttgag
cgtaacgctgaactgcaacgtctggtgaaatggtggggtgagttccaggtttccgcgcca
ccagaccaaaaagggatgcttaacgaactggatgaagaaccgtcaccgcgtcgtcgtact
cgtcgtccacgcaaacgcgcaccgcgtcgtgagggtaccgcatga
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