Escherichia coli O18 K1 H7 IHE3034 (ExPEC): ECOK1_0377
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Entry
ECOK1_0377 CDS
T01997
Symbol
sbcD
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
eih
Escherichia coli O18:K1:H7 IHE3034 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
eih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eih03400
]
ECOK1_0377 (sbcD)
DNA repair and recombination proteins [BR:
eih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ECOK1_0377 (sbcD)
Archaeal homologous recombinant proteins
ECOK1_0377 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
MIP-T3_C
Motif
Other DBs
NCBI-ProteinID:
ADE89611
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All DBs
Position
complement(419292..420494)
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AA seq
400 aa
AA seq
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MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQAHQVDAIIVAGDVFDTGSPPSYAR
TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG
TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGAQPLPII
TTGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS
PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDIS
QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL
SVEEVFNRRLALEELDESQQQRLQHLFATTLHSLAGEHEA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatccttcacacctcagactggcatctcggccagaacttctacagtaaaagccgc
gaagccgaacatcaggcttttcttgactggctgctggagacagcacaagcccatcaggtg
gatgcgattattgttgccggtgatgttttcgataccggctcgccgcccagttacgcccgc
acgttatacaaccgttttgttgtcaatttacagcaaactggctgtcatctggtggtactg
gcaggaaaccatgactcggtcgccacgctgaatgaatcgcgcgatatcatggcgttcctc
aatactaccgtggtcgccagcgccggacatgcgccgcaaatattgccccgtcgcgacggg
acgccaggcgcggtgctgtgtcccataccttttttacgcccgcgtgacattattaccagc
caggcggggcttaacggtattgaaaaacagcagcatttgctggcggctattactgattat
tatcaacaacattatgccgatgcctgcaaactgcgcggcgctcagcctctgcccatcatc
accactggacatttaacgaccgtgggtgccagtaaaagtgacgccgtgcgtgacatttat
attggcacgctggacgcgtttccggcacaaaactttccaccagccgactacatcgcgctc
gggcatattcaccgcgcgcagattattggcggcatggaacatgttcgctattgcggttcc
cccataccactgagttttgatgaatgcggtaagagtaaatatgtccatctggtgacattt
tcaaacggcaaattagagagcgtggaaaacctgaacgtaccggtaacgcaacccatggcg
gtgctgaaaggcgatctggcgtcgattaccgcacagctggaacagtggcgcgatatatca
caggagccgcctgtctggctggatatcgaaatcactactgatgagtatctgcatgatatt
cagcgcaaaatccaggcattaaccgaatcattgcctgtcgaagttttgctggtacgccgg
agtcgtgaacagcgcgagcgtgtgttagccagccaacagcgtgaaaccctcagcgaactc
agcgtcgaagaggtgttcaatcgccgtctggcactggaagaactggatgaatcacagcag
caacgtctgcagcatcttttcgccacgacgttgcatagcctcgccggagaacacgaagca
tga
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