Escherichia coli O18 K1 H7 IHE3034 (ExPEC): ECOK1_1221
Help
Entry
ECOK1_1221 CDS
T01997
Name
(GenBank) LysM domain/ErfK/YbiS/YcfS/YnhG family protein
KO
K19236
L,D-transpeptidase YcfS
Organism
eih
Escherichia coli O18:K1:H7 IHE3034 (ExPEC)
Pathway
eih01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
eih00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
ECOK1_1221
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
eih01002
]
ECOK1_1221
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
eih01011
]
ECOK1_1221
Peptidases and inhibitors [BR:
eih01002
]
Cysteine peptidases
Family C82
ECOK1_1221
Peptidoglycan biosynthesis and degradation proteins [BR:
eih01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
ECOK1_1221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
ADE89146
LinkDB
All DBs
Position
complement(1257487..1258449)
Genome browser
AA seq
320 aa
AA seq
DB search
MMIKTHFSRWLTFFTFAAAVALALPAKANTWPLPQAGSRLVGENKFHVVENDGGSLEAIA
KKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGK
NSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGP
DNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNI
INTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVM
DVRSGMPVDVRRHQVSPQTL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtgatgatcaaaacgcatttttctcgctggctaacgttttttacgttcgccgctgccgtg
gcgctggcgctaccggcaaaagccaacacctggccgctgccgcaagcgggcagtcgtctg
gttggtgaaaacaaatttcatgtggtggaaaatgacggtggctctctggaagcgatcgcc
aaaaaatataacgtcggctttctcgctctgttacaggctaaccccggcgttgatccttac
gtaccgcgcgcgggtagcgtgttaacgatcccgttgcaaaccctacttccagacgcgccg
cgcgaaggcattgtgatcaacattgcggagctgcgtctctattactacccgccgggtaaa
aattcggtaaccgtgtatcccatcggcattggtcagttaggtggtgacacgctgacgcca
acgatggtgactaccgtttcagacaaacgtgcaaacccaacctggacgccaacggcaaac
atccgcgcgcggtataaggcacagggaattgagttgcctgcggtagtgccggcaggaccg
gataacccaatgggccatcatgcgattcgtctggcggcctatggcggcgtttatttgctt
catggtacgaacgccgatttcggcattggcatgcgggtaagttctggctgtattcgtctg
cgggatgacgatatcaaaacactctttagccaggtcaccccaggcaccaaagtgaatatc
atcaacactccgataaaagtctctgccgaaccaaacggtgcgcgtctggttgaagtacat
cagccgctgtctgagaagattgatgacgatccgcagctgctgccaattacgctgaatagc
gcaatgcaatcatttaaagatgcagcacaaactgacgctgaagtgatgcaacatgtgatg
gatgtccgttccgggatgccggtggatgtccgccgtcatcaagtgagcccacaaactctg
taa
DBGET
integrated database retrieval system
