Escherichia coli O18 K1 H7 IHE3034 (ExPEC): ECOK1_1518
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Entry
ECOK1_1518 CDS
T01997
Symbol
pspF
Name
(GenBank) sigma-54 dependent transcriptional regulator PspF
KO
K03974
psp operon transcriptional activator
Organism
eih
Escherichia coli O18:K1:H7 IHE3034 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
eih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eih03000
]
ECOK1_1518 (pspF)
Transcription factors [BR:
eih03000
]
Prokaryotic type
Other transcription factors
Others
ECOK1_1518 (pspF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
HTH_8
AAA_2
UPF0175
AAA
AAA_16
AAA_7
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ADE92575
LinkDB
All DBs
Position
complement(1530492..1531469)
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AA seq
325 aa
AA seq
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MAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPF
ISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGGTLFLDELATAPMMVQEKL
LRVIEYGELERVGGSQPLQVNVRLVCATNADLPAMVNEGTFRADLLDRLAFDVVQLPPLR
ERESDIMLMAEHFAIQMCREIKLPLFPGFTEHARETLLNYRWPGNIRELKNVVERSVYRH
GTSDYPLDDIIIDPFKRRPSEEAIAVSENTSLPTLPLDLREFQMQQEKELLQLSLQQGKY
NQKRAAELLGLTYHQFRALLKKHQI
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatacaaagataatttactcggtgaggcgaacagctttctcgaagtgctggaa
caggtttcgcatctcgcaccgctggacaaaccggtgctcatcatcggcgagcgcggcacc
ggtaaagagctgatcgccagccgcctgcattatctctcctcccgttggcaagggccgttt
atttcccttaactgcgcggcgttaaatgaaaatctgttggattccgaactgtttggtcac
gaagcgggggcgtttaccggtgcgcaaaaacgtcatccagggagatttgaacgtgccgac
ggcggtacgctatttcttgatgaactcgctacggcaccgatgatggtgcaggaaaaatta
ttgcgtgtgattgagtacggtgaactggagcgcgtcggcggcagccagccattgcaggtg
aatgtgcggttggtatgcgcgacgaatgccgatctcccggcgatggtcaatgaaggtact
tttcgcgcagacctgctcgaccgactagcgttcgatgttgtgcaactgccaccactgcgc
gagcgtgaaagcgacattatgttgatggcagaacactttgccatccagatgtgtcgggaa
atcaagctgcctctgttcccgggttttacagagcacgccagagaaacattgctgaattat
cgctggccgggaaatatacgtgaattgaaaaacgtggtggaacgttcagtgtatcgtcac
ggcaccagcgattatccgcttgatgacatcattattgatccctttaaacgccgtccatct
gaagaagccatcgccgtttcagaaaacacctcgcttccgacgctgccactggatttacgc
gagtttcagatgcagcaggaaaaagagttgctgcaactcagtttgcaacaggggaaatat
aaccagaagcgcgccgctgaattgctggggttaacctatcatcagttccgcgcgttgttg
aaaaagcaccagatttag
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