Escherichia coli O18 K1 H7 IHE3034 (ExPEC): ECOK1_1558
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Entry
ECOK1_1558 CDS
T01997
Symbol
dbpA
Name
(GenBank) ATP-independent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
eih
Escherichia coli O18:K1:H7 IHE3034 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
eih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eih03009
]
ECOK1_1558 (dbpA)
Enzymes [BR:
eih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ECOK1_1558 (dbpA)
Ribosome biogenesis [BR:
eih03009
]
Prokaryotic type
rRNA helicases
ECOK1_1558 (dbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ADE89673
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All DBs
Position
1570906..1572279
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AA seq
457 aa
AA seq
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MTAFSTLNVLPPAQLTNLNELGYLTMTPVQDAALPAILAGKDVRVQAKTGSGKTAAFGLG
LLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQ
HAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQT
LLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQ
PSSCVVFCNTKKDCQSVCDVLNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDV
AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDML
QIKLNWQTLPANSSIVPLEAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAV
HPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgctttttctaccctgaatgttttgcctcccgcccaactcacaaaccttaatgag
ttgggttatttaaccatgacgccggtgcaggacgccgcgcttccggcgatccttgccgga
aaagatgttcgcgtgcaggcgaaaaccggcagcggcaaaacggcggcttttggcctcggc
ttgttacagcaaattgatgcgtcgctatttcaaacccaggctttagtgctgtgtcctacg
cgtgaactggcggatcaggtggcaggtgaattgcgtcggctggcgcgttttctgccaaat
accaaaattttgacgttgtgcggtggtcaaccgttcggtatgcagcgtgattcgttgcaa
catgcgccgcatattatcgtggcaacgccgggccgtttgctggatcacctgcaaaaaggc
actgtatcactggatgcgttgaatacgctggtgatggatgaggccgaccgcatgctggat
atgggatttagcgacgccattgatgatgtcatccgttttgcgccagcatctcggcagacg
cttctgttttcggcaacctggccggaggccatcgccgcaatcagcggaagagtgcaacgc
gatcctttagcgattgaaattgactcaacagatgctctgccacctattgaacaacaattt
tatgagacatccagcaaaggcaaaattcctctgttgcaacggttattaagcttgcatcag
ccatcctcttgcgtggtgttttgcaataccaaaaaagattgccagtctgtctgcgacgtg
ctgaatgaagtagggcaaagtgcattgtcgttacacggcgatctggagcaacgcgatcgc
gatcagaccctggtacgttttgctaacggtagcgcccgtgtactggtcgcgactgatgtt
gctgcgcgtggtctggatataaaatcgcttgagctggtggtgaactttgagctggcgtgg
gaccctgaagttcatgtacatcgcatcggtcgtacagctcgtgcaggaaatagtggtctg
gcgatcagtttctgtgccccggaagaagcacagcgggccaatatcatttctgacatgttg
cagataaaacttaactggcaaacgctgccagcgaatagttccattgtgccgctggaagca
gaaatggcaacgttgtgtatcgatggcgggaaaaaagccaaaatgcgcccgggtgatgta
ttaggtgcgctgacaggagacatcgggcttgatggcgcagatattggcaaaatcgccgtg
catccggcgcatgtttatgtcgcggtgcgtcaggctgttgctcataaagcatggaaacag
ctacagggcgggaagattaaaggaaaaacgtgccgggtgcggttattaaaataa
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