Escherichia coli O18 K1 H7 IHE3034 (ExPEC): ECOK1_3664
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Entry
ECOK1_3664 CDS
T01997
Symbol
csrD
Name
(GenBank) carbon storage regulator
KO
K18765
RNase E specificity factor CsrD
Organism
eih
Escherichia coli O18:K1:H7 IHE3034 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
eih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eih03019
]
ECOK1_3664 (csrD)
Messenger RNA biogenesis [BR:
eih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ECOK1_3664 (csrD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
GDPD
Motif
Other DBs
NCBI-ProteinID:
ADE89475
LinkDB
All DBs
Position
complement(3763854..3765794)
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AA seq
646 aa
AA seq
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MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFST
LRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGTNDLFRELSVPLIKHPGMSLR
LVYQDPMGNYFHSLMTTAPLTGAIGFIILMLFLAVRWLQRQLAGQELLETRATRILNGER
GSNVLGTIYEWPPRTSSALDTLLCEIQNAREQHSRLDTLIRSYAAQDMKTGLNNRLFFDN
QLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFSLTNLLSTFMMRYPGAL
LARYHRSDFAALLPHRTLKEAESIASQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT
EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV
TREGRVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLLISRLIPLLRYWPEENL
AIQVTVESLIRPRFQRWLRDPLMQCEKSQRRRIIIELAEADVGQHISRLQPVIRLVNALG
VRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQV
YATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagattaacgacgaaattttcggcctttgtcacgctgctcaccgggttaacaattttt
gtgactttgctgggctgttcgctaagtttctacaacgccattcagtataagtttagtcat
cgtgttcaggcggtggcgacggcgattgatacccacctagtgtcgaatgacttcagcaca
ttaaggccacaaattaccgaattaatgatgtcggcagatatcgttcgtgtagacctgctc
catggtgataagcaggtttataccctggccagaaatggtagttatcgtccggttggcacc
aacgatctgtttcgtgaactgagcgttccgttgataaagcatccggggatgtcgctgcgt
ctggtttatcaggatccgatgggcaactatttccattctttaatgactaccgcgccgctc
acgggggcgattggctttatcattcttatgctcttcctggcggtacgctggttacaacgg
caacttgccgggcaagaattgctggaaacccgggctactcgtatcttaaacggtgagcgt
ggctctaatgtgttgggaaccatctatgaatggccgcccagaaccagcagtgcgctggat
acgctgctttgtgaaattcagaacgcacgcgaacaacacagccgtcttgatacgctgatc
cgctcttatgccgcccaggacatgaaaaccggcctcaataaccgactctttttcgataat
cagttagcaacgttactggaagatcaagagaaagtaggtacccacgggatcgtgatgatg
attcgtctgccggatttcaatatgttgagtgatacctgggggcacagccaggttgaagaa
cagttcttctctctgacgaatctgctatcgacatttatgatgcgctaccctggcgcactg
ctggcgcgttaccaccgcagtgattttgctgcgctgttaccgcaccggacgttaaaagag
gcagagagcatcgccagtcagttaatcaaagccgtcgataccttgccgaacaataaaatg
ctcgatcgcgacgatatgatccacattggtatctgtgcctggcgtagtggtcaggatacc
gagcaggtaatggaacatgcagagtctgccacgcgtaatgcgggattgcagggcggcaat
agctgggctatttacgatgactcgttgcctgaaaaaggacgcggtaatgttcgctggcgt
acgcttatcgagcaaatgctcagtcgcggcggcccgcgcctttatcaaaaaccggcggtt
actcgcgaaggccgggttcatcatcgtgaactcatgtgccgcatcttcgatggtaatgaa
gaggttagctcggcagagtatatgccgatggtcttgcagtttggtttatcggaagagtat
gaccgcctgctaatcagccgtcttattccactattgcgttactggccagaggaaaatctg
gcgattcaggttaccgttgagtcgctgattcgcccgcgttttcagcgttggctgcgcgat
ccgttaatgcaatgtgaaaaatcgcaacgaagacgcataattattgaacttgcagaggcc
gatgtaggtcaacatatcagtcgcttacaacctgttattcgtttagtgaatgctttaggg
gtacgggtagccgtcaaccaggctggtttgacgctggtaagcaccagttggatcaaagaa
cttaatgttgagttactcaagctccatccggggctggtcagaaacattgagaagcgaacg
gagaaccagctgctggttcaaagcctggtggaagcctgctccgggaccagcacccaggtt
tacgccaccggcgtacgttcgcgaagcgagtggcagaccctgattcagcgcggtgttaca
ggtgggcaaggggattttttcgcgtcctcacagccacttgatactaacgtgaaaaaatat
tcacaaagatactcggtttaa
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