Escherichia coli O18 K1 H7 IHE3034 (ExPEC): ECOK1_3954
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Entry
ECOK1_3954 CDS
T01997
Symbol
gadW
Name
(GenBank) transcriptional regulator GadW
KO
K21906
AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
Organism
eih
Escherichia coli O18:K1:H7 IHE3034 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
eih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eih03000
]
ECOK1_3954 (gadW)
Transcription factors [BR:
eih03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ECOK1_3954 (gadW)
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_Mga
GIPC1_GH1
Motif
Other DBs
NCBI-ProteinID:
ADE88784
LinkDB
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Position
complement(4043568..4044296)
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AA seq
242 aa
AA seq
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MAHVCSVILVRRSFDIHHEQQKISLHNESILLLDKNLADDFAFCSLDTRRLDIEELTVCH
YLQNIRQLPRNLGLHSKDRLLINQSPPIQLVTAIFDSFNDPRVNSPILSKMLYLSCLSMF
SHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAERMYTSESLIKKKLQDENTCF
SKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYFINTFRQYYGVTPHQFSQHSPGT
FS
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggctcatgtctgctcggtgatcctcgttcgtcgttcattcgatattcatcatgaacag
caaaaaatatcgttgcataacgagagtatcctgctgctggataaaaatttggcagacgat
tttgcgttttgttcacttgatacgcgacggctggatatcgaagagctgacagtttgccat
tacttacaaaatattcgtcagttgccacgcaatttaggattgcatagcaaagaccgtttg
ttaattaaccagtcaccccccatacagctggtgacggcgatttttgatagtttcaatgac
ccccgggtcaattcgccgatactgagcaaaatgctctatctttcctgtttatcaatgttt
tctcataagaaagaactgatccccttacttttcaatagtatcagtactgtttcaggaaaa
gttgaacgccttattagctttgatatcgctaaacgttggtatctacgcgatatcgcagaa
agaatgtacaccagcgagagtctcatcaaaaaaaagttgcaggatgaaaatacctgtttc
agtaaaatattactcgcctccaggatgtcgatggccagacgattactcgagttacgtcaa
atacctctgcatactattgcggaaaaatgtggctatagcagtacgtcatactttataaat
acatttagacaatattatggtgtaacgccacatcagttttcgcaacattcgccgggtacc
ttttcctga
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